Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiophagus_20hannah_20[genbank_20GCA_5F000516915.1_202013-12-11] 296,399 sequences; 1,594,074,654 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq4627 116 3e-21 seq2566 84.2 2e-11 seq22 82.4 6e-11 >seq4627 Length=64116 Score = 116 bits (128), Expect = 3e-21 Identities = 103/129 (80%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 ||| || || || || ||||||||||||||||| || || || |||| |||||||| | Sbjct 20685 CATGAAGAGGTCCGGGATCCAGAGGGCGTAGAAAAGGTCCCGGGCTCTCTGCTCCTCCTT 20744 Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459 ||| || || ||||||||||||||||||||||||| ||||| || |||||||| Sbjct 20745 CCCGGTGTTCTTCTTCAAGTCGAGGAACTCAAAGATGTCGAAGTGCCAGGGCTCCAGGTA 20804 Query 66460 GATGGCGAA 66468 ||||||||| Sbjct 20805 GATGGCGAA 20813 Score = 111 bits (122), Expect = 1e-19 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108 ||| ||||| ||||| |||||||| || || ||||| |||||||||| ||||| || Sbjct 18711 GGTGTACTCCACAATCTCGGTGCAGAGGTTGCTGCACTTGATGGTGCCCAGGTTCTGCTG 18770 Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168 || ||||| || ||||| | |||||||| | |||||| || || || ||||| || Sbjct 18771 GTTGCTCTTCCGGTTGCAGGAGTCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTG 18830 Query 66169 GGACTCAATGATGGCGTGCCAAAG 66192 |||||||||||||||| ||| || Sbjct 18831 CGACTCAATGATGGCGTACCAGAG 18854 >seq2566 Length=113286 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 |||| || ||| || || | ||||| | || || || |||||||| |||||||||| Sbjct 11572 TGGAGCGATTCAGCCAAGAAATACAAGTAACAGAAGCACGCTGTTTCTATGGCTTCCAGA 11631 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGG 61375 ||||||||||||| | || || || ||||| ||| | || || ||||| ||||| | || Sbjct 11632 TTGCCATGGAGAACATTCATTCAGAAATGTATAGTTTACTTATTGATACTTACATTAAGG 11691 Query 61376 A 61376 | Sbjct 11692 A 11692 >seq22 Length=1337131 Score = 82.4 bits (90), Expect = 6e-11 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 61258 GAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATT 61317 |||||||| || || |||||| | | || || ||||||||||| ||||||||||| Sbjct 642759 GAACGTTTTAGCCAAGAAGTGCAAATCCCAGAAGCTCGTTGTTTCTATGGCTTCCAGATA 642700 Query 61318 GCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCA 61372 | || || ||||| || || |||||||||||| | | || || || ||||||| Sbjct 642699 TCAATAGAAAATGTTCATTCTGAGATGTACAGTTTGTTAATAGACACTTACATCA 642645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396131840141360