Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantherophis_20guttatus_20[genbank_20GCA_5F001185365.1_202015-07-21] 883,920 sequences; 1,404,220,341 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq248151 136 2e-30 seq335336 75.2 5e-12 >seq248151 Length=8628 Score = 136 bits (150), Expect = 2e-30 Identities = 90/100 (90%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 3 AAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCC 62 ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||| Sbjct 7418 AAAAGAAACTAACCAGGATTCCCTCAGTAACAGCGAGTGAAGAGGGAAGAGCCCAGTGCC 7359 Query 63 GAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||| || ||| |||| ||| |||||| |||||||||| Sbjct 7358 GAATCTCCATCCCACGGTAGGGTGCGGGAAATGTGGCGTA 7319 >seq335336 Length=5996 Score = 75.2 bits (82), Expect = 5e-12 Identities = 70/89 (79%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 3 AAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCC 62 ||||||||||||||||||||| ||| ||| | ||||||| ||||||||| ||||| | Sbjct 3871 AAAAGAAACTAACCAGGATTCTTTCAATAATGATGAGTGAAGAGGGAAGAGTCCAGCACT 3812 Query 63 GAATCCCCGCCCCGCGGTGGGGCGCGGGA 91 ||||||| || | ||| ||| |||| Sbjct 3811 TAATCCCCATCCTACAGTGAGGCAAGGGA 3783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 228490732800