Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantherophis_20guttatus_20[genbank_20GCA_5F001185365.1_202015-07-21] 883,920 sequences; 1,404,220,341 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq203971 98.7 1e-18 >seq203971 Length=3048 Score = 98.7 bits (108), Expect = 1e-18 Identities = 132/177 (75%), Gaps = 10/177 (6%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC-TTTGCTCGAATACATTACCATGG 71 |||||||||||||||||| || |||||||| ||||| |||| |||||| | | || Sbjct 2364 TTTACTTTGAAAAAATTAAAGTGTTCAAAG-AGGCCGGTTGCCGGAATACTCCAGCTAGG 2306 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131 |||||| ||||||||| | |||||||||||||| ||||| | ||| | | ||||| Sbjct 2305 AATAATGGAATAGGAC-TCCGGTTCTATTTTGTTGGTTT-TCGGAACCGGGGCCATGATT 2248 Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTC---AAAGGTGAAATTCTTGGA 185 || | ||| | |||||| | ||||| || | | |||||||||||||||| Sbjct 2247 AAGAGGGACGGCCGGGGGCATTCGTATT---GTGCCTCTAGAGGTGAAATTCTTGGA 2194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507615756800