Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantherophis_20guttatus_20[genbank_20GCA_5F001185365.1_202015-07-21]
883,920 sequences; 1,404,220,341 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq741790 77.0 5e-12
seq217164 73.4 6e-11
seq16634 73.4 6e-11
>seq741790
Length=364
Score = 77.0 bits (84), Expect = 5e-12
Identities = 87/114 (76%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| ||||| | ||| || |||| || || |
Sbjct 355 GTACGAGAGGAACCGCAGG-TTCAGACCT-TTGGTGTATGCATTTGGCTGAGGAGCCAAT 298
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| || ||||||||||| |||||||| |||| ||||||||||||||||||
Sbjct 297 GGGGCAAAGCTACCATCCCTGGGATTATGATTGAATGCCTCTAAGTCAGAATCC 244
>seq217164
Length=14312
Score = 73.4 bits (80), Expect = 6e-11
Identities = 86/114 (75%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||| |||||||| || | |||||| | ||||| | | | || |||| || || |
Sbjct 4618 GTACAAGAGGAACTGCAGG-TTCAGACTT-TTGGTGTACGTGCTTGGCTGAGGAGCCAAT 4561
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| || ||||||||||| | ||||| || |||||||||||| |||||||||||
Sbjct 4560 GGGGCTAAGCTACCATCGGTGGGATTTTGACTGAACGCCTCTCAGTCAGAATCC 4507
>seq16634
Length=1198
Score = 73.4 bits (80), Expect = 6e-11
Identities = 58/70 (83%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 45 TGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAA 104
|| |||| || || || ||||||||||||||| ||||||| ||||||||||||||
Sbjct 90 TGGCTGAGGAGCCAATGGGGCGAAGCTACCATCTTTAGGATTATAACTGAACGCCTCTAA 149
Query 105 GTCAGAATCC 114
||||||||||
Sbjct 150 GTCAGAATCC 159
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 812185210880
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |