Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pelodiscus_20sinensis_20[refseq_20GCF_5F000230535.1_202012-07-24] 19,904 sequences; 2,202,483,752 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq7601 107 1e-21 seq779 107 1e-21 seq6134 89.7 3e-16 seq2898 82.4 4e-14 seq2047 80.6 1e-13 >seq7601 Length=1688416 Score = 107 bits (118), Expect = 1e-21 Identities = 94/117 (80%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| |||| ||||| |||| ||| |||| ||||| |||| Sbjct 1086877 GAACCCAAAGACTTTGGTTTCCTGTAAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 1086818 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | ||||||||| ||||| |||| |||||||| |||||||||||||||||| Sbjct 1086817 GATCGCGAGTCGGCATCGTTTATGGTTGGAACTACGACAGTATCTGATCGTCTTCGA 1086761 >seq779 Length=3640918 Score = 107 bits (118), Expect = 1e-21 Identities = 94/117 (80%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| |||| |||| | |||| ||| |||| ||||| |||| Sbjct 3615986 GAACCCAAAGACTTTGGTTTCCCGTAGGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 3615927 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | ||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct 3615926 GATCGCGAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 3615870 >seq6134 Length=3911284 Score = 89.7 bits (98), Expect = 3e-16 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| ||||||||| | | || |||| |||| |||| || Sbjct 2389752 GAACCCAAAGACTTTGGTTTCTCGTAGGCTTCCCAGCGGGTCACGGGAATAATGCTTCCA 2389693 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||| ||||| ||||| ||| | ||||||||||||||||||| ||||||| Sbjct 2389692 GATCGTGAGTAGGCATCGTTTATGGTCAGAACTACGACGGTATCTGATCATCTTCGA 2389636 >seq2898 Length=86761 Score = 82.4 bits (90), Expect = 4e-14 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 3 ACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGA 62 || ||||||||||| |||| ||| | |||| | | |||| ||||| |||| || Sbjct 46403 ACTCAAAGACTTTGGTTTCCTGTAGGCTGCCTGGAGGGTCATGGGAATAACGCCGCCGGA 46462 Query 63 TCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 || ||||||||| ||||| ||| ||||||| ||||||||||||||||||| Sbjct 46463 TCGTGAGTCGGCATCGTTTATGGTCGGAACTACGATGGTATCTGATCGTCTTCGA 46517 >seq2047 Length=1246781 Score = 80.6 bits (88), Expect = 1e-13 Identities = 59/69 (86%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 49 ATAACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGAT 108 ||||| |||| |||| | ||||||||| ||||||||| |||||||||||||||||| Sbjct 850597 ATAACGCCGCCGGATCGCGAGTCGGCATCGTTTACGGTCGGAACTACGACGGTATCTGAT 850538 Query 109 CGTCTTCGA 117 ||||||||| Sbjct 850537 CGTCTTCGA 850529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278348050560