Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pelodiscus_20sinensis_20[refseq_20GCF_5F000230535.1_202012-07-24]
19,904 sequences; 2,202,483,752 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq7601 107 1e-21
seq779 107 1e-21
seq6134 89.7 3e-16
seq2898 82.4 4e-14
seq2047 80.6 1e-13
>seq7601
Length=1688416
Score = 107 bits (118), Expect = 1e-21
Identities = 94/117 (80%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||| |||| ||||| |||| ||| |||| ||||| ||||
Sbjct 1086877 GAACCCAAAGACTTTGGTTTCCTGTAAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 1086818
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||| | ||||||||| ||||| |||| |||||||| ||||||||||||||||||
Sbjct 1086817 GATCGCGAGTCGGCATCGTTTATGGTTGGAACTACGACAGTATCTGATCGTCTTCGA 1086761
>seq779
Length=3640918
Score = 107 bits (118), Expect = 1e-21
Identities = 94/117 (80%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||| |||| |||| | |||| ||| |||| ||||| ||||
Sbjct 3615986 GAACCCAAAGACTTTGGTTTCCCGTAGGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 3615927
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||| | ||||||||| ||||| ||| |||||||||||||||||||||||||||
Sbjct 3615926 GATCGCGAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 3615870
>seq6134
Length=3911284
Score = 89.7 bits (98), Expect = 3e-16
Identities = 90/117 (77%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||| ||||||||| | | || |||| |||| |||| ||
Sbjct 2389752 GAACCCAAAGACTTTGGTTTCTCGTAGGCTTCCCAGCGGGTCACGGGAATAATGCTTCCA 2389693
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||| ||| ||||| ||||| ||| | ||||||||||||||||||| |||||||
Sbjct 2389692 GATCGTGAGTAGGCATCGTTTATGGTCAGAACTACGACGGTATCTGATCATCTTCGA 2389636
>seq2898
Length=86761
Score = 82.4 bits (90), Expect = 4e-14
Identities = 87/115 (76%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 3 ACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGA 62
|| ||||||||||| |||| ||| | |||| | | |||| ||||| |||| ||
Sbjct 46403 ACTCAAAGACTTTGGTTTCCTGTAGGCTGCCTGGAGGGTCATGGGAATAACGCCGCCGGA 46462
Query 63 TCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|| ||||||||| ||||| ||| ||||||| |||||||||||||||||||
Sbjct 46463 TCGTGAGTCGGCATCGTTTATGGTCGGAACTACGATGGTATCTGATCGTCTTCGA 46517
>seq2047
Length=1246781
Score = 80.6 bits (88), Expect = 1e-13
Identities = 59/69 (86%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 49 ATAACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGAT 108
||||| |||| |||| | ||||||||| ||||||||| ||||||||||||||||||
Sbjct 850597 ATAACGCCGCCGGATCGCGAGTCGGCATCGTTTACGGTCGGAACTACGACGGTATCTGAT 850538
Query 109 CGTCTTCGA 117
|||||||||
Sbjct 850537 CGTCTTCGA 850529
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278348050560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |