Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pelodiscus_20sinensis_20[refseq_20GCF_5F000230535.1_202012-07-24]
19,904 sequences; 2,202,483,752 total letters
Query= AAMG01000750.1
Length=102
Score E
Sequences producing significant alignments: (Bits) Value
seq4243 176 2e-42
seq5682 125 3e-27
seq887 98.7 5e-19
seq5572 86.0 3e-15
>seq4243
Length=1141289
Score = 176 bits (194), Expect = 2e-42
Identities = 100/102 (98%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 800582 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 800523
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
||||||||||| ||||||||||||||||||| ||||||||||
Sbjct 800522 CCGAATCCCCGTCCCGCGGTGGGGCGCGGGAAATGTGGCGTA 800481
>seq5682
Length=3350749
Score = 125 bits (138), Expect = 3e-27
Identities = 89/102 (87%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
|||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||
Sbjct 2479060 GGAAAAGAAACTAACCAGGATTCCCTCAATAATGGTGAGTGAACAGGGAAGAGCCCAGCA 2479001
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
||||| ||| | | | | |||||| |||||| ||||||| ||
Sbjct 2479000 CCGAACCCCTGTCTCACAGTGGGGTGCGGGAAATGTGGCATA 2478959
Score = 122 bits (134), Expect = 4e-26
Identities = 88/102 (86%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
|||||| ||||||||||| |||||||||||||||| ||||||||||| ||||||||||||
Sbjct 2478626 GGAAAATAAACTAACCAGAATTCCCTCAGTAACGGTGAGTGAACAGGAAAGAGCCCAGCG 2478567
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
| |||||||| ||||| |||||| | || |||||| |||
Sbjct 2478566 CTGAATCCCCATCCCGCAGTGGGGTATGAGAAATGTGGTGTA 2478525
>seq887
Length=1640475
Score = 98.7 bits (108), Expect = 5e-19
Identities = 68/77 (88%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
|||||||||||||||||| ||||||||| || || |||||||||||||||||||||||
Sbjct 1564162 GGAAAAGAAACTAACCAGCGTTCCCTCAGCAATGGTGAGTGAACAGGGAAGAGCCCAGCA 1564221
Query 61 CCGAATCCCCGCCCCGC 77
||||||||| |||||
Sbjct 1564222 TCGAATCCCCATCCCGC 1564238
>seq5572
Length=3134962
Score = 86.0 bits (94), Expect = 3e-15
Identities = 49/50 (98%), Gaps = 0/50 (0%)
Strand=Plus/Minus
Query 31 AACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCGCGGT 80
||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2980552 AACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGTCCCGCGGT 2980503
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 230357007360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |