Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pelodiscus_20sinensis_20[refseq_20GCF_5F000230535.1_202012-07-24] 19,904 sequences; 2,202,483,752 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq2047 77.0 2e-12 seq7601 73.4 2e-11 >seq2047 Length=1246781 Score = 77.0 bits (84), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| || |||||||| ||||||||||||||||||| Sbjct 852022 CTCACTAAACCATC-CAATCGGTAGTA-GCAACGGGCGGTGTGTACAAAGGGCAGGGACT 851965 Query 109 TAATACAACGCAAGCT 124 |||| ||| || |||| Sbjct 851964 TAAT-CAATGCGAGCT 851950 >seq7601 Length=1688416 Score = 73.4 bits (80), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| | ||||||| | ||||||||||||||||| | Sbjct 1087406 CTCACTAAACCATC-CAATCGGTAGTA-GTGACGGGCAGTGTGTACAAAGGGCAGGGGCT 1087349 Query 109 TAATACAACGCAAGCT 124 |||| |||||| |||| Sbjct 1087348 TAAT-CAACGCGAGCT 1087334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300743870720