Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pelodiscus_20sinensis_20[refseq_20GCF_5F000230535.1_202012-07-24] 19,904 sequences; 2,202,483,752 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq6134 95.1 1e-17 seq779 95.1 1e-17 seq3736 82.4 9e-14 >seq6134 Length=3911284 Score = 95.1 bits (104), Expect = 1e-17 Identities = 143/193 (74%), Gaps = 8/193 (4%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||||||| |||||||| ||| |||||| | | Sbjct 2389490 AAACCAACAAAATAGAATCGGA-GTCCTATTCCATTATTCCTAGCTGGAGTATTCCAGTG 2389432 Query 70 TA-AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT-CCGCACA 127 ||||||||||||||||||||||||| |||| |||| | ||| | | | | ||| Sbjct 2389431 ACCAGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAATCATTTTGGACCTTGCAGGACA 2389372 Query 128 C-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGTA-CTCGC 182 | || | ||| |||| | ||| | || ||||| | |||||||| | || ||| ||||| Sbjct 2389371 CTCAGTTAAGAGCATCAAGGGAGCGCCGAGAGGCAGGGGCTGGGACAGGCGGTAGCTCGC 2389312 Query 183 CGTGAGGCGGACC 195 | | |||||||| Sbjct 2389311 CTCGCGGCGGACC 2389299 >seq779 Length=3640918 Score = 95.1 bits (104), Expect = 1e-17 Identities = 82/99 (83%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||||||| |||||||| ||| |||||| |||| Sbjct 3615722 AAACCAACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGGAGTATTCCGGCG 3615664 Query 70 TA-AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 ||||||||||||||||||||||||| |||| ||||| Sbjct 3615663 ACCAGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 3615625 >seq3736 Length=3466063 Score = 82.4 bits (90), Expect = 9e-14 Identities = 79/99 (80%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| | | ||||||||| |||||||| | | |||||| ||| Sbjct 1740777 AAACCAACAAAATAGAACCAGA-GTCCTATTCCATTATTCCTAGTTGGAGTATTCTGGCA 1740835 Query 70 TA-AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 ||||||||||||||||||||||||| |||| ||||| Sbjct 1740836 ACCAGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 1740874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595085233536