Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pelodiscus_20sinensis_20[refseq_20GCF_5F000230535.1_202012-07-24]
19,904 sequences; 2,202,483,752 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq6134 95.1 1e-17
seq779 95.1 1e-17
seq3736 82.4 9e-14
>seq6134
Length=3911284
Score = 95.1 bits (104), Expect = 1e-17
Identities = 143/193 (74%), Gaps = 8/193 (4%)
Strand=Plus/Minus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||||||||||||| || | ||||||||| |||||||| ||| |||||| | |
Sbjct 2389490 AAACCAACAAAATAGAATCGGA-GTCCTATTCCATTATTCCTAGCTGGAGTATTCCAGTG 2389432
Query 70 TA-AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT-CCGCACA 127
||||||||||||||||||||||||| |||| |||| | ||| | | | | |||
Sbjct 2389431 ACCAGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAATCATTTTGGACCTTGCAGGACA 2389372
Query 128 C-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGTA-CTCGC 182
| || | ||| |||| | ||| | || ||||| | |||||||| | || ||| |||||
Sbjct 2389371 CTCAGTTAAGAGCATCAAGGGAGCGCCGAGAGGCAGGGGCTGGGACAGGCGGTAGCTCGC 2389312
Query 183 CGTGAGGCGGACC 195
| | ||||||||
Sbjct 2389311 CTCGCGGCGGACC 2389299
>seq779
Length=3640918
Score = 95.1 bits (104), Expect = 1e-17
Identities = 82/99 (83%), Gaps = 2/99 (2%)
Strand=Plus/Minus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||||||||||||| || | ||||||||| |||||||| ||| |||||| ||||
Sbjct 3615722 AAACCAACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGGAGTATTCCGGCG 3615664
Query 70 TA-AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107
||||||||||||||||||||||||| |||| |||||
Sbjct 3615663 ACCAGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 3615625
>seq3736
Length=3466063
Score = 82.4 bits (90), Expect = 9e-14
Identities = 79/99 (80%), Gaps = 2/99 (2%)
Strand=Plus/Plus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||||||||||||| | | ||||||||| |||||||| | | |||||| |||
Sbjct 1740777 AAACCAACAAAATAGAACCAGA-GTCCTATTCCATTATTCCTAGTTGGAGTATTCTGGCA 1740835
Query 70 TA-AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107
||||||||||||||||||||||||| |||| |||||
Sbjct 1740836 ACCAGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 1740874
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595085233536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |