Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pelodiscus_20sinensis_20[refseq_20GCF_5F000230535.1_202012-07-24]
19,904 sequences; 2,202,483,752 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq3736 109 6e-22
seq779 105 7e-21
seq6134 102 8e-20
>seq3736
Length=3466063
Score = 109 bits (120), Expect = 6e-22
Identities = 131/174 (75%), Gaps = 3/174 (2%)
Strand=Plus/Minus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC-CTTTGCTCGAATACATTACCATGG 71
||||||||||||||||||||| ||||||||||||| |||| |||||| | | ||
Sbjct 1740874 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTGGTTGCCAGAATACTCCAACTAGG 1740815
Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131
|||||| ||||||||| | ||||||||||||| ||||| | ||| | | | |||||
Sbjct 1740814 AATAATGGAATAGGAC-TCTGGTTCTATTTTGTTGGTTT-TTGGAACTCGGGCCATGATT 1740757
Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185
|| | |||| | ||||| | ||||| | | ||||||||||||||||
Sbjct 1740756 AAGAGGGATGGCTGGGGGCATTCGTATTGTGCCGCTACAGGTGAAATTCTTGGA 1740703
>seq779
Length=3640918
Score = 105 bits (116), Expect = 7e-21
Identities = 130/174 (75%), Gaps = 3/174 (2%)
Strand=Plus/Plus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC-CTTTGCTCGAATACATTACCATGG 71
||||||||||||||||||||| ||||||||||||| | || |||||| | | ||
Sbjct 3615625 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTGGTCGCCGGAATACTCCAGCTAGG 3615684
Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131
|||||| ||||||||| | |||||||||||||| ||||| | ||| | | |||||
Sbjct 3615685 AATAATGGAATAGGAC-TCCGGTTCTATTTTGTTGGTTT-TCGGAACTGGGGCCATGATT 3615742
Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185
|| | ||| | |||||| | ||||| | | ||||||||||||||||
Sbjct 3615743 AAGAGGGACGGCCGGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGA 3615796
>seq6134
Length=3911284
Score = 102 bits (112), Expect = 8e-20
Identities = 131/176 (74%), Gaps = 11/176 (6%)
Strand=Plus/Plus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC-CTTTGCTCGAATACATTACCATGGA 72
|||||||||||||||||||| ||||||||||||| | || |||||| | | |||
Sbjct 2389394 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTGGTCACTGGAATACTCCAGCTAGGA 2389453
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTA---GGACCGCCCGTAATGA 129
||||| ||||||||| | || ||||||||||| ||||| | ||| ||| ||||
Sbjct 2389454 ATAATGGAATAGGAC-TCCGATTCTATTTTGTTGGTTTTGAACTGGA--GCC----ATGA 2389506
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185
| || | ||| || |||||| | ||||| || | ||||||||||||||||
Sbjct 2389507 TTAAGAGGGACAGCCGGGGGCATTTGTATTGTGCTGCTAGAGGTGAAATTCTTGGA 2389562
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511901276160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |