Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pelodiscus_20sinensis_20[refseq_20GCF_5F000230535.1_202012-07-24] 19,904 sequences; 2,202,483,752 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq3895 98.7 8e-16 seq3620 98.7 8e-16 >seq3895 Length=4157194 Score = 98.7 bits (108), Expect = 8e-16 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 |||| |||||| ||||| |||||| | | || || || |||||||| ||||| |||| Sbjct 2189898 TGGAGCGTTTCAGCCAGGAAGTGCAAATCCCAGAAGCTCGCTGTTTCTATGGCTTTCAGA 2189957 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCA 61372 || || |||||||| |||||||||||||||||| | || || || || ||||||| Sbjct 2189958 TTTTAATTGAGAATGTTCACTCGGAGATGTACAGTTTGCTGATAGACACTTACATCA 2190014 >seq3620 Length=164711 Score = 98.7 bits (108), Expect = 8e-16 Identities = 108/141 (77%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 66329 TCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGT 66388 ||||| || ||| || |||||||| ||||||||||| |||| || || | ||||| Sbjct 110955 TCTACCCGTTTCATGAAGAGATCAGGAATCCAGAGGGCAAAGAACAGGTCCCTGGCTCGC 111014 Query 66389 TGCTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCA 66447 |||||||| | || ||| || || || ||| || |||||||||||||| |||||| Sbjct 111015 TGCTCCTCCTTCCCAGTG-TTCTTCTTCAGGTCAAGAAACTCAAAGATGTCCAAATGCCA 111073 Query 66448 TGGTTCCAGGTAGATGGCGAA 66468 || |||||||||||||| || Sbjct 111074 CGGCTCCAGGTAGATGGCAAA 111094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397471557954560