Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq156 127 3e-27 seq444 125 1e-26 >seq156 Length=2933057 Score = 127 bits (140), Expect = 3e-27 Identities = 164/222 (74%), Gaps = 11/222 (5%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||| ||| ||||||||| | |||| ||||| || ||||| | | |||||| |||||| | Sbjct 855273 GTATAAAAGGCAGGGACTGAATCAATGCGAGTTT-ATGACCCCCACTTACTGGGAATT-C 855216 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT----TTCAAAG 116 |||||| | | || ||||||||| | ||||||||||| |||| ||||| | Sbjct 855215 CTCGTTCATGGAGAATAATTGCAATCCCCAATCCCCATCAC----AAATGGGGTTCAATG 855160 Query 117 A-TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCG 175 ||||| | || ||| || ||| | | || || ||| | |||||||| | || Sbjct 855159 GGTTACCTGCACTGGTCAGCGTAGGGTAGACACACGCTGACCCAGTTAGTGTAGCACACG 855100 Query 176 TGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 ||| |||| | ||||||||||||||||||||||||||||||| Sbjct 855099 TGCAGCCCTGGACATCTAAGGGCATCACAGACCTGTTATTGC 855058 >seq444 Length=1145637 Score = 125 bits (138), Expect = 1e-26 Identities = 160/214 (75%), Gaps = 5/214 (2%) Strand=Plus/Plus Query 22 TCAACGCGAGCTTGATGACTCG-CGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATT 80 ||||||| | || ||||| || | |||||| |||||| ||||||| | | || |||| Sbjct 1010888 TCAACGCAAATTT-ATGACCCGACACTTACTGGGAATT-CCTCGTTCATGGGGAATAATT 1010945 Query 81 GCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TTACCCGGACCTGTCGGCCAAG 139 ||||| | ||||||||||||| ||||| | ||||| | |||||||||| || Sbjct 1010946 GCAATCCCCAATCCCCATCACGAATGGGGTTCAACGGGTTACCTGCACCTGTCGGCGTAG 1011005 Query 140 GTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCA 199 | | | || || ||| |||||||||| || ||| |||| | ||||||||||||| Sbjct 1011006 GGTAGACACACGCTGAGCCAGTCAGTGTAGCACGTGTGTAGCCCCGGACATCTAAGGGCA 1011065 Query 200 TCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 ||||||||||||||||| ||||| || ||||| Sbjct 1011066 TCACAGACCTGTTATTG-CTCAATCTCAGGTGGC 1011098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751899838535