Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq444 132 9e-29 seq156 131 3e-28 >seq444 Length=1145637 Score = 132 bits (146), Expect = 9e-29 Identities = 177/241 (73%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 1011124 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCTGA-GATTGAG-CAATAACAGGTCTGTG 1011067 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| ||| || ||||||||||| | || || || | Sbjct 1011066 ATGCCCTTAGATGTCCGGGGCTACACACGTGCTACACTGACTGGCTCAGCGTGTGTCTAC 1011007 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| |||| |||| ||||| | | || | | ||||| ||||||| | | |||| Sbjct 1011006 CCTACGCCGACAGGTGCAGGTAACCCGTTGAACCCCATTCGTGATGGGGATTGGGGATTG 1010947 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCG-CGTGTCATCAGCACGCGTTGAT 309 |||||||| | | | |||||||||| || |||||| | || ||||| | |||||||| Sbjct 1010946 CAATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGTCGGGTCATAAATTTGCGTTGAT 1010887 Query 310 T 310 | Sbjct 1010886 T 1010886 >seq156 Length=2933057 Score = 131 bits (144), Expect = 3e-28 Identities = 186/258 (72%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||||||| | ||| | |||| || || |||| |||||||||||||||| Sbjct 855017 CTTCTTAGAGGGATAAGTGGCATTCAGCC-ATCCGAGACTGAG-CAATAACAGGTCTGTG 855074 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| ||||| | |||||||| || | | || || || | Sbjct 855075 ATGCCCTTAGATGTCCAGGGCTGCACGTGTGCTACACTAACTGGGTCAGCGTGTGTCTAC 855134 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| || | || ||||| | | || | | | ||| ||||||| | | |||| Sbjct 855135 CCTACGCTGACCAGTGCAGGTAACCCATTGAACCCCATTTGTGATGGGGATTGGGGATTG 855194 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | | |||||||||| || |||||| | | ||||| | | ||| |||||| Sbjct 855195 CAATTATTCTCCATGAACGAGGAATTCCCAGTAAGTGGGGGTCATAAACTCGCATTGATT 855254 Query 311 ACGTCCCTGCCCTTTGTA 328 ||||||||| ||| || Sbjct 855255 CAGTCCCTGCCTTTTATA 855272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947069769472