Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq672 129 2e-27 seq353 102 2e-19 seq833 86.0 2e-14 >seq672 Length=623393 Score = 129 bits (142), Expect = 2e-27 Identities = 291/428 (68%), Gaps = 41/428 (10%) Strand=Plus/Minus Query 89 GCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACC 148 ||||||||||| ||||||||||||||| |||||||| ||||| ||| |||||| |||| Sbjct 55687 GCCTGCTGCCTGCCTTGGATGTGGTAG-TGTTTCTCAAGCTCCTTCTTGGGAATCAAACC 55629 Query 149 CTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGAT 208 || ||| ||| ||| || | ||||||| ||||| | ||| || |||||||||| Sbjct 55628 CTGATTACCCATTATCCATGCTTACCATGATAGGCACAGAAAGTACTATTGAAAGTTGAT 55569 Query 209 AGGGCAGAAATTTGAATGAACCATCGCCGGCTCAA---GGCCATGCGAT--TCGTTAAGT 263 ||||| | ||| ||| ||| || | | | | | ||||| || | | | || Sbjct 55568 TGGGCAAATATTCAAAT---ACATTGCTGCCCCTATGGAGACATGCAATCAGCCTAAGGT 55512 Query 264 TATTATGAATCACCAAGGAGCCCCGAAGGGCGT---TGGTTTTTTATCTAATAAATACAC 320 ||| || |||||| | || || | || | | |||||| || |||||| | Sbjct 55511 TATCTAGAGGCACCAAAGCAGCCAGATGAGCTTGAGTTGTTTTTGGCCTGATAAATGGAT 55452 Query 321 CCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATG 380 | | || | | ||| || || ||||||||||||| ||||| || | Sbjct 55451 GCATCCC----TGGAGGT------CA---AT----ACTAGAATTACCACAGTTATTCAAG 55409 Query 381 TAGTAAGGT---ACT-ATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCA 436 |||| ||| | | | |||| ||| |||||| |||||||||| |||| ||| ||||| Sbjct 55408 TAGT--GGTTGGAGTGACCAAAGGAACCATAACTAATTTAATGAGACATTTGCAATTTCA 55351 Query 437 CTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACT 496 || || || | |||||||||| |||||| |||||||| || |||||| || Sbjct 55350 CTATAACACCTGTCTGTACTTAGACA-----CGCTTAACCTTTGAGATAAACATATG-CT 55297 Query 497 ACTGGCAG 504 | |||||| Sbjct 55296 ATTGGCAG 55289 >seq353 Length=1481324 Score = 102 bits (112), Expect = 2e-19 Identities = 93/116 (80%), Gaps = 1/116 (1%) Strand=Plus/Minus Query 97 CCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAAT-CGAACCCTAATTC 155 ||||||||| ||||||||||| |||||||| ||||||||||||||| ||| || |||| Sbjct 1055685 CCTTCCTTGAATGTGGTAGCCATTTCTCAGTCTCCCTCTCCGGAATATTAACTCTGATTC 1055626 Query 156 CCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGG 211 || |||| || | | | |||||||| | | |||||||||||||||||||| Sbjct 1055625 CCTGTTATCCATGGTCATCATGGTAGCCATAGAAAGTACCATCGAAAGTTGATAGG 1055570 >seq833 Length=423569 Score = 86.0 bits (94), Expect = 2e-14 Identities = 82/101 (81%), Gaps = 3/101 (3%) Strand=Plus/Minus Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCT-TATACTTAGACAT 463 ||||||||| ||||||||||||| || |||||||||| | | | | |||||| | || Sbjct 35708 ATAACTGATCTAATGAGCCATTCACAATTTCACTGTA-ACACCCATGTGTACTTATATAT 35650 Query 464 GCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||| |||||| ||| | ||||||||||| | |||||||||| Sbjct 35649 GCAAGGCTTAGTCTCTCAGACAAGCATA-GGCTACTGGCAG 35610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510192335104