Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pogona_20vitticeps_20[refseq_20GCF_5F900067755.1_202017-02-28] 13,749 sequences; 1,716,675,060 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq148 120 2e-22 >seq148 Length=2989754 Score = 120 bits (132), Expect = 2e-22 Identities = 106/130 (82%), Gaps = 2/130 (2%) Strand=Plus/Minus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 ||| || ||||| || |||||||||||||||||||| || || || ||||||||||| | Sbjct 2370629 CATGAAAAGATCTGGGATCCAGAGGGCGTAGAAGAGGTCTCGGGCGCGTTGCTCCTCCTT 2370570 Query 66400 GCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGT 66458 || ||| || || || ||| || ||||||||||||||| |||||| || ||||||| Sbjct 2370569 CCCCGTG-TTCTTCTTCAGGTCCAGAAACTCAAAGATGTCGAAATGCCAGGGCTCCAGGT 2370511 Query 66459 AGATGGCGAA 66468 |||||||||| Sbjct 2370510 AGATGGCGAA 2370501 Score = 104 bits (114), Expect = 2e-17 Identities = 121/160 (76%), Gaps = 4/160 (3%) Strand=Plus/Minus Query 66050 GTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGA 66109 || ||||| || || |||||||| || || ||||| || || |||| ||||| || Sbjct 2372610 GTGTACTCCACGATCTCGGTGCAGAGGTTGCTGCACTTGATTGTCCCCAGGTTCTGCTGG 2372551 Query 66110 TTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGG 66169 || ||||| || ||||| | |||||||| | |||||| || || || ||||| ||| Sbjct 2372550 TTGCTCTTCCGGTTGCAGGAGTCCTTGTAGAGCATGTATGGGGTCCCCGTCTCCGTCTGG 2372491 Query 66170 GACTCAATGATGGCGTGCCAAAGAGC-GC-GTGCCTTCAC 66207 |||||||||||||||| || ||||| || | |||||||| Sbjct 2372490 GACTCAATGATGGCGTACC--AGAGCTGCTGGGCCTTCAC 2372453 Score = 87.8 bits (96), Expect = 1e-12 Identities = 126/175 (72%), Gaps = 2/175 (1%) Strand=Plus/Minus Query 65681 TCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAATAAATG 65740 |||||| |||| |||||| || | || ||||||| || || || | | |||||| Sbjct 2374754 TCGTACGGCCCCTGCTCCTTAGCCACTTCGCAGCTGGCTTCTAGCGCCCCGTAGTAAATG 2374695 Query 65741 GTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATACC-CAT 65799 ||||| || || | | || || | ||||| |||||| |||| ||||| ||| Sbjct 2374694 GTCTCAAAGATCTGCTGGTTCAGCAGCTGCGCCTCTGGGCTCTCAAACGG-ATACCGCAT 2374636 Query 65800 CAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGC 65854 ||||| ||||| ||| ||||| || || |||||||| |||||||| || || ||| Sbjct 2374635 CAGGATAAAAGCGTCCGCCAGCCCCTGCACTCCAATGCCGATGGGCCGGTGGCGC 2374581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397501381145360