Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protobothrops_20mucrosquamatus_20[refseq_20GCF_5F001527695.2_202016- 01-22] 52,280 sequences; 1,673,876,332 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq4813 98.7 3e-18 >seq4813 Length=31911 Score = 98.7 bits (108), Expect = 3e-18 Identities = 79/94 (84%), Gaps = 1/94 (1%) Strand=Plus/Plus Query 15 AAGCACCGGCTAA-CTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATC 73 ||||| |||| || || |||||||||||||||||||||||| | ||| ||||||| || Sbjct 28339 AAGCATCGGCAAATCTTCGTGCCAGCAGCCGCGGTAATACGAGAGATGCTAGCGTTATTC 28398 Query 74 GGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTT 107 |||||| ||||||||||| ||| | |||||||| Sbjct 28399 AGAATTATTGGGCGTAAAGTGTGTGTAGGCGGTT 28432 Score = 98.7 bits (108), Expect = 3e-18 Identities = 79/94 (84%), Gaps = 1/94 (1%) Strand=Plus/Minus Query 15 AAGCACCGGCTAA-CTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATC 73 ||||| |||| || || |||||||||||||||||||||||| | ||| ||||||| || Sbjct 30625 AAGCATCGGCAAATCTTCGTGCCAGCAGCCGCGGTAATACGAGAGATGCTAGCGTTATTC 30566 Query 74 GGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTT 107 |||||| ||||||||||| ||| | |||||||| Sbjct 30565 AGAATTATTGGGCGTAAAGTGTGTGTAGGCGGTT 30532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1288925797120