Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protobothrops_20mucrosquamatus_20[refseq_20GCF_5F001527695.2_202016- 01-22] 52,280 sequences; 1,673,876,332 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq4813 132 1e-28 seq7105 91.5 4e-16 >seq4813 Length=31911 Score = 132 bits (146), Expect = 1e-28 Identities = 81/86 (94%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1458 ATCGTTACATCTTTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 1399 Query 127 CCGTTATTGTTACGGCCGCCGTTTAC 152 ||||||| ||||| |||||||||||| Sbjct 1398 CCGTTATAGTTACAGCCGCCGTTTAC 1373 Score = 132 bits (146), Expect = 1e-28 Identities = 81/86 (94%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 25595 ATCGTTACATCTTTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 25654 Query 127 CCGTTATTGTTACGGCCGCCGTTTAC 152 ||||||| ||||| |||||||||||| Sbjct 25655 CCGTTATAGTTACAGCCGCCGTTTAC 25680 >seq7105 Length=15349 Score = 91.5 bits (100), Expect = 4e-16 Identities = 74/87 (85%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||||| || ||| |||||| |||| |||||||| ||||||||| ||||||||||||| Sbjct 11049 TCGTTACACCGTTCATGCAGGACGGAGCTTACCCGCCAAGGAATTATGCTACCTTAGGAC 10990 Query 128 CGTTA-TTGTTACGGCCGCCGTTTACC 153 ||||| |||| | ||||||||| ||| Sbjct 10989 CGTTACGTGTT-CAGCCGCCGTTAACC 10964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260140853760