Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protobothrops_20mucrosquamatus_20[refseq_20GCF_5F001527695.2_202016- 01-22] 52,280 sequences; 1,673,876,332 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq161 167 1e-39 seq49 105 3e-21 >seq161 Length=187407 Score = 167 bits (184), Expect = 1e-39 Identities = 98/102 (96%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 170915 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAAGAGGGAAGAGCCCAGCG 170856 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||| ||||||||||| ||||||| |||||||||| Sbjct 170855 CCGAATCCCCGTCCCGCGGTGGGACGCGGGAAATGTGGCGTA 170814 >seq49 Length=351248 Score = 105 bits (116), Expect = 3e-21 Identities = 64/68 (94%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| Sbjct 349520 GGAAAAGAAACTAACAAGGATTCCCTCAGTAACTGCGAGTGAACAGGGAAGAGCCCAGCA 349461 Query 61 CCGAATCC 68 ||||| || Sbjct 349460 CCGAAGCC 349453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230287075200