Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protobothrops_20mucrosquamatus_20[refseq_20GCF_5F001527695.2_202016- 01-22] 52,280 sequences; 1,673,876,332 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq4813 113 1e-22 >seq4813 Length=31911 Score = 113 bits (124), Expect = 1e-22 Identities = 88/105 (84%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| || ||| ||||||| |||||||||||||||| || ||||||||||| |||| Sbjct 28733 TACGTTCGAAAGAATGAAACTTAAAGGAATTGACGGGGGTCCTTACAAGCGGTGGGGCAT 28792 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGAC 105 |||||||||||||| | ||| |||| |||||||||||| || ||| Sbjct 28793 GTGGTTTAATTCGATGTAACACGAAAAACCTTACCAAAACTAGAC 28837 Score = 113 bits (124), Expect = 1e-22 Identities = 88/105 (84%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| || ||| ||||||| |||||||||||||||| || ||||||||||| |||| Sbjct 30231 TACGTTCGAAAGAATGAAACTTAAAGGAATTGACGGGGGTCCTTACAAGCGGTGGGGCAT 30172 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGAC 105 |||||||||||||| | ||| |||| |||||||||||| || ||| Sbjct 30171 GTGGTTTAATTCGATGTAACACGAAAAACCTTACCAAAACTAGAC 30127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503213708800