Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protobothrops_20mucrosquamatus_20[refseq_20GCF_5F001527695.2_202016- 01-22] 52,280 sequences; 1,673,876,332 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq4813 86.0 1e-14 >seq4813 Length=31911 Score = 86.0 bits (94), Expect = 1e-14 Identities = 75/92 (82%), Gaps = 1/92 (1%) Strand=Plus/Minus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 |||||||||| | |||||| |||||||| || | |||||||| || | ||||||||| Sbjct 28430 CCGCCTACACACACTTTACGCCCAATAATTCTGAATAACGCTAGCATCTCTCGTATTACC 28371 Query 248 GCGGCTGCTGGCACGTAG-TTAGCCGTGGCTT 278 ||||||||||||||| || || |||| |||| Sbjct 28370 GCGGCTGCTGGCACGAAGATTTGCCGATGCTT 28339 Score = 86.0 bits (94), Expect = 1e-14 Identities = 75/92 (82%), Gaps = 1/92 (1%) Strand=Plus/Plus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 |||||||||| | |||||| |||||||| || | |||||||| || | ||||||||| Sbjct 30534 CCGCCTACACACACTTTACGCCCAATAATTCTGAATAACGCTAGCATCTCTCGTATTACC 30593 Query 248 GCGGCTGCTGGCACGTAG-TTAGCCGTGGCTT 278 ||||||||||||||| || || |||| |||| Sbjct 30594 GCGGCTGCTGGCACGAAGATTTGCCGATGCTT 30625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828380243880