Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protobothrops_20mucrosquamatus_20[refseq_20GCF_5F001527695.2_202016- 01-22] 52,280 sequences; 1,673,876,332 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq4813 96.9 8e-18 >seq4813 Length=31911 Score = 96.9 bits (106), Expect = 8e-18 Identities = 81/98 (83%), Gaps = 1/98 (1%) Strand=Plus/Plus Query 13 AAGCCCCGGCTAA-CTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCC 71 |||| |||| || || |||||||||||||||||||||||| | ||||||||||| | Sbjct 28339 AAGCATCGGCAAATCTTCGTGCCAGCAGCCGCGGTAATACGAGAGATGCTAGCGTTATTC 28398 Query 72 GGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTT 109 |||||| ||||||||||| ||| ||||| ||||| || Sbjct 28399 AGAATTATTGGGCGTAAAGTGTGTGTAGGCGGTTTATT 28436 Score = 96.9 bits (106), Expect = 8e-18 Identities = 81/98 (83%), Gaps = 1/98 (1%) Strand=Plus/Minus Query 13 AAGCCCCGGCTAA-CTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCC 71 |||| |||| || || |||||||||||||||||||||||| | ||||||||||| | Sbjct 30625 AAGCATCGGCAAATCTTCGTGCCAGCAGCCGCGGTAATACGAGAGATGCTAGCGTTATTC 30566 Query 72 GGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTT 109 |||||| ||||||||||| ||| ||||| ||||| || Sbjct 30565 AGAATTATTGGGCGTAAAGTGTGTGTAGGCGGTTTATT 30528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1202570967040