Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protobothrops_20mucrosquamatus_20[refseq_20GCF_5F001527695.2_202016- 01-22] 52,280 sequences; 1,673,876,332 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq4813 125 2e-26 seq7105 77.0 1e-11 >seq4813 Length=31911 Score = 125 bits (138), Expect = 2e-26 Identities = 80/87 (92%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1457 TCGTTACATCTTTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 1398 Query 446 GGTTATAGTTACCACCGCCGTTTACTG 472 ||||||||||| ||||||||||||| Sbjct 1397 CGTTATAGTTACAGCCGCCGTTTACTG 1371 Score = 125 bits (138), Expect = 2e-26 Identities = 80/87 (92%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 25596 TCGTTACATCTTTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 25655 Query 446 GGTTATAGTTACCACCGCCGTTTACTG 472 ||||||||||| ||||||||||||| Sbjct 25656 CGTTATAGTTACAGCCGCCGTTTACTG 25682 >seq7105 Length=15349 Score = 77.0 bits (84), Expect = 1e-11 Identities = 59/70 (84%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 381 GGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTT 440 || ||||||||| || ||| |||||| |||| |||||||| ||||||||| |||||||| Sbjct 11054 GGTAGTCGTTACACCGTTCATGCAGGACGGAGCTTACCCGCCAAGGAATTATGCTACCTT 10995 Query 441 AGGATGGTTA 450 |||| |||| Sbjct 10994 AGGACCGTTA 10985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1701509985280