Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protobothrops_20mucrosquamatus_20[refseq_20GCF_5F001527695.2_202016- 01-22] 52,280 sequences; 1,673,876,332 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq3202 87.8 7e-12 >seq3202 Length=309785 Score = 87.8 bits (96), Expect = 7e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 349069 CGTGGCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGAC 349128 || ||||| || |||||||||| || |||| || | ||| | |||| ||| || || Sbjct 21933 CGAGGCGTTGATGATCTCCTTGATCCTTGGCACTCCTAAGGTGATGTTCATGGAGGCCAC 21992 Query 349129 GCCGGCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGC 349181 ||||||||| ||||| |||| || |||| ||||||| |||||| ||||||| Sbjct 21993 GCCGGCAAAATGGAAAGTCTTCAGAGTCATCTGCGTGCCGGGCTCCCCGATGC 22045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2083308704079440