Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq2488 143 1e-31 seq9868 122 4e-25 seq3003 87.8 7e-15 >seq2488 Length=187404 Score = 143 bits (158), Expect = 1e-31 Identities = 106/124 (85%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 560 TAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAAC 619 || ||| | |||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 186321 TAACTGCTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGTAAAGCCAGAGGAAAC 186380 Query 620 TCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGG 679 ||||||||||| || |||||| ||| ||||||||||| || || | ||||||||||| Sbjct 186381 TCTGGTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCATCCGACCTGGGTATAGGG 186440 Query 680 GCGA 683 |||| Sbjct 186441 GCGA 186444 >seq9868 Length=17690 Score = 122 bits (134), Expect = 4e-25 Identities = 123/160 (77%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||||||||||||| | || ||| |||||| | | ||||| ||||||| Sbjct 223 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 164 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| ||||||||||| ||||||| || | ||||| ||||||| |||||| | Sbjct 163 ACCGGCACGAGACCGATAGTCGACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 104 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| || || ||||||| ||| | ||| || || Sbjct 103 AGAGAGTTCAAGAGGGCGTGAAACCGTTAAGAGGTAAACG 64 >seq3003 Length=156155 Score = 87.8 bits (96), Expect = 7e-15 Identities = 94/123 (76%), Gaps = 1/123 (1%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 || ||| |||| ||||||||||||| | || |||| ||||| | | ||||| ||||||| Sbjct 8996 GAATCGGGTTGCTTGGGAATGCAGCCCAAAGTGGGGAGTAAACTCCATCTAAGGCTAAAT 9055 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTG-GA 158 | ||| ||||| ||||| ||||||| | | ||||| ||||||| |||||| || Sbjct 9056 ACCGGCATGAGACTGATAGTTGACAAGTACCATAAGGGAAAGTTGAAAAGAACTTTGAGA 9115 Query 159 AAG 161 ||| Sbjct 9116 AAG 9118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079161026150