Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15]
39,113 sequences; 1,435,052,152 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq1190 136 6e-30
seq10871 100 5e-19
seq15 86.0 1e-14
seq2488 84.2 3e-14
seq83 78.8 1e-12
seq144 73.4 6e-11
>seq1190
Length=291108
Score = 136 bits (150), Expect = 6e-30
Identities = 90/100 (90%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
|||||||| |||||||||||||||| || |||||||||| ||||||| ||| ||||| |
Sbjct 16481 GTCTCGTTAATTATCGGAATTAACCAAACCAATCACTCCATCAACTAAAAACAGCCATAC 16540
Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||||||| |||||||||||||||||||| |||||||
Sbjct 16541 ACCACCACCCACAGAATCAAGAAAGAGCTATCGATCTGTC 16580
>seq10871
Length=9888
Score = 100 bits (110), Expect = 5e-19
Identities = 76/90 (84%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 169 TTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCC 228
|||| |||||||||||||||||| ||| | ||||||||||| |||| |||||| |||
Sbjct 3046 TTATTGGAATTAACCAGACAAATTGCTCTATCAACTAAGAACACTCATGTACCACCTCCC 3105
Query 229 ATAGAATCAAGAAAGAGCTATCAATCTGTC 258
| ||||| || ||||||||||||||||||
Sbjct 3106 ACAGAATTGAGGAAGAGCTATCAATCTGTC 3135
>seq15
Length=966651
Score = 86.0 bits (94), Expect = 1e-14
Identities = 52/55 (95%), Gaps = 0/55 (0%)
Strand=Plus/Minus
Query 166 TCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCAC 220
|| |||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 272348 TCATTATTGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGACCATGCAC 272294
>seq2488
Length=187404
Score = 84.2 bits (92), Expect = 3e-14
Identities = 61/67 (91%), Gaps = 3/67 (4%)
Strand=Plus/Minus
Query 15 GTCAGTGTAGCGCGCGTGC-GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 73
||||| |||| |||||||| |||||||| || |||||||||||||||||||||||||| |
Sbjct 12100 GTCAGGGTAGTGCGCGTGCAGGCCCAGA-CACCTAAGGGCATCACAGACCTGTTATTG-C 12043
Query 74 TCAAACT 80
|||||||
Sbjct 12042 TCAAACT 12036
>seq83
Length=706952
Score = 78.8 bits (86), Expect = 1e-12
Identities = 49/53 (92%), Gaps = 0/53 (0%)
Strand=Plus/Plus
Query 19 GTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71
||||||||| ||||| |||| | ||||||||||||||||||||||||||||||
Sbjct 694583 GTGTAGCGCACGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG 694635
>seq144
Length=618862
Score = 73.4 bits (80), Expect = 6e-11
Identities = 74/96 (77%), Gaps = 4/96 (4%)
Strand=Plus/Minus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
|| |||||| ||| | ||||| ||||||||||||||||||||||||||| | | |
Sbjct 253674 GTTTCGTTCATTACCAGAATTCTACAGACAAATCACTCCACCAACTAAGAATGAC----C 253619
Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATC 254
|| ||||| || ||||| | ||| ||| ||||||
Sbjct 253618 ACGACCACACACAGAATTGAAAAACTGCTGTCAATC 253583
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796498086753
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |