Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1190 136 6e-30 seq10871 100 5e-19 seq15 86.0 1e-14 seq2488 84.2 3e-14 seq83 78.8 1e-12 seq144 73.4 6e-11 >seq1190 Length=291108 Score = 136 bits (150), Expect = 6e-30 Identities = 90/100 (90%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||||||| |||||||||||||||| || |||||||||| ||||||| ||| ||||| | Sbjct 16481 GTCTCGTTAATTATCGGAATTAACCAAACCAATCACTCCATCAACTAAAAACAGCCATAC 16540 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||| |||||||||||||||||||| ||||||| Sbjct 16541 ACCACCACCCACAGAATCAAGAAAGAGCTATCGATCTGTC 16580 >seq10871 Length=9888 Score = 100 bits (110), Expect = 5e-19 Identities = 76/90 (84%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 169 TTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCC 228 |||| |||||||||||||||||| ||| | ||||||||||| |||| |||||| ||| Sbjct 3046 TTATTGGAATTAACCAGACAAATTGCTCTATCAACTAAGAACACTCATGTACCACCTCCC 3105 Query 229 ATAGAATCAAGAAAGAGCTATCAATCTGTC 258 | ||||| || |||||||||||||||||| Sbjct 3106 ACAGAATTGAGGAAGAGCTATCAATCTGTC 3135 >seq15 Length=966651 Score = 86.0 bits (94), Expect = 1e-14 Identities = 52/55 (95%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 166 TCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCAC 220 || |||| |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 272348 TCATTATTGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGACCATGCAC 272294 >seq2488 Length=187404 Score = 84.2 bits (92), Expect = 3e-14 Identities = 61/67 (91%), Gaps = 3/67 (4%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGC-GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 73 ||||| |||| |||||||| |||||||| || |||||||||||||||||||||||||| | Sbjct 12100 GTCAGGGTAGTGCGCGTGCAGGCCCAGA-CACCTAAGGGCATCACAGACCTGTTATTG-C 12043 Query 74 TCAAACT 80 ||||||| Sbjct 12042 TCAAACT 12036 >seq83 Length=706952 Score = 78.8 bits (86), Expect = 1e-12 Identities = 49/53 (92%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 19 GTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||||||||| ||||| |||| | |||||||||||||||||||||||||||||| Sbjct 694583 GTGTAGCGCACGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG 694635 >seq144 Length=618862 Score = 73.4 bits (80), Expect = 6e-11 Identities = 74/96 (77%), Gaps = 4/96 (4%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 || |||||| ||| | ||||| ||||||||||||||||||||||||||| | | | Sbjct 253674 GTTTCGTTCATTACCAGAATTCTACAGACAAATCACTCCACCAACTAAGAATGAC----C 253619 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATC 254 || ||||| || ||||| | ||| ||| |||||| Sbjct 253618 ACGACCACACACAGAATTGAAAAACTGCTGTCAATC 253583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796498086753