Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq3313 178 2e-42 seq2195 145 1e-32 seq9417 131 3e-28 seq292 129 1e-27 seq3100 113 8e-23 seq2858 98.7 2e-18 seq2893 73.4 7e-11 >seq3313 Length=143749 Score = 178 bits (196), Expect = 2e-42 Identities = 128/148 (86%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 34 TCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTA 93 ||||||||||||||||||||||| |||||||||||||| |||||||||| || ||||||| Sbjct 78889 TCAGTAGGGTAAAACTAACCTGTTTCATGACGGTCTAATCCCAGCTCACATTTCCTATTA 78830 Query 94 GTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACAT 153 ||||||||||| |||||| ||| |||||||||||| | ||||||||| | ||||| Sbjct 78829 GTGGGTGAACAGTCCAACCCTTGGTGAATTCTGCTTCACAACAATAGGAAGAACTGACAT 78770 Query 154 CGAAGGATCAAAAAGCAACGTCGCTATG 181 | || |||||||||||||| | |||||| Sbjct 78769 CAAAAGATCAAAAAGCAACATTGCTATG 78742 >seq2195 Length=200925 Score = 145 bits (160), Expect = 1e-32 Identities = 134/170 (79%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 123 TCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGA 182 |||||||| |||||||||||| || ||||||||||||||||||| | |||| ||||| Sbjct 197377 TCTGCTTCACAATGATAGGAAGACCCAACATCGAAGGATCAAAAAGTGATGTCGTTATGA 197318 Query 183 ACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCA 242 || ||||| ||||||||||||||||| || |||| ||||||||| |||||| || | | Sbjct 197317 ACATTTGGCCGCCACAAGCCAGTTATCTCTATGGTTACTTTTCTGACACCTCCTGCTTAA 197258 Query 243 AATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 || | | | | |||||||| ||||| ||||| |||| |||||| Sbjct 197257 AACTCAAACAGTCAGAAGGATCGTGAGGCCCTGCTTTCGTGGTCTGTATT 197208 >seq9417 Length=20684 Score = 131 bits (144), Expect = 3e-28 Identities = 133/173 (77%), Gaps = 3/173 (2%) Strand=Plus/Plus Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 || |||||| | |||||||||||||| |||||||| |||||||||| || | |||| Sbjct 3117 AAGTCTGCTCCACAATGATAGGAAGAGCTGACATCGAGGGATCAAAAAATGACATTGCTA 3176 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||| |||| |||||||||||||||||||||||||||||| |||||| || || | Sbjct 3177 TGAATGCTTAGCTGCCACAAGCCAGTTATCCCTGTGGTAATGTTTCTGACA---CTTTCT 3233 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 | || | | | | || || |||| | ||| ||||||| |||||| |||| Sbjct 3234 TAAAGTCCCAAAAGTCTGAAAGATCATGATGCCCCACTTTCCTGGTTTATATT 3286 >seq292 Length=512050 Score = 129 bits (142), Expect = 1e-27 Identities = 89/101 (88%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 134 ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTG 193 ||||||||||||| |||||||||||||||||||| || |||||||||| ||||| | Sbjct 127116 ATGATAGGAAGAGTTGACATCGAAGGATCAAAAAGTGACATCGCTATGAATGCTTGACCA 127175 Query 194 CCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTC 234 |||||||||| ||||||||||||||| ||||||| |||||| Sbjct 127176 CCACAAGCCAATTATCCCTGTGGTAATTTTTCTGACACCTC 127216 >seq3100 Length=149573 Score = 113 bits (124), Expect = 8e-23 Identities = 95/117 (81%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 88 CTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGC 147 ||||||||||||||||||||||| |||| ||||||||||| ||| ||||||||| Sbjct 98306 CTATTAGTGGGTGAACAATCCAATGCTTGGTGAATTCTGCTTTACAATGGTAGGAAGAGT 98365 Query 148 CGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAG 204 || ||| ||| ||||||||| | ||||| |||||| ||||||| || ||||||| Sbjct 98366 GGATATCAAAGAATCAAAAAGTGATGTCGCCATGAACATTTGGCTGGCAGAAGCCAG 98422 >seq2858 Length=164590 Score = 98.7 bits (108), Expect = 2e-18 Identities = 57/59 (97%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 73771 TCAGCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT 73713 >seq2893 Length=163368 Score = 73.4 bits (80), Expect = 7e-11 Identities = 85/115 (74%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178 ||||||||| || ||| ||| | ||| |||||| ||||||||||||||||| | ||| Sbjct 161660 GAATTCTGCCTCACAATGGTAGTATCAGCTGACATCCAAGGATCAAAAAGCAACTTTGCT 161601 Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCT 233 | || ||||| | | |||||||| | || || ||| ||||||| || || Sbjct 161600 AGAAATGCTTGACCACAACAAGCCAATCCTCTTGATGCTAATTTTTCTGACATCT 161546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854065818528