Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq2488 163 5e-38 seq83 109 1e-21 seq6435 82.4 1e-13 >seq2488 Length=187404 Score = 163 bits (180), Expect = 5e-38 Identities = 173/224 (77%), Gaps = 3/224 (1%) Strand=Plus/Plus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCC-GCACGCGCGCTA 164 |||||||| |||||||||||||||||||||||||| || |||||||| |||||||| ||| Sbjct 12036 AGTTTGAG-CAATAACAGGTCTGTGATGCCCTTAGGTG-TCTGGGCCTGCACGCGCACTA 12093 Query 165 CACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAAC 224 | ||||| | || || || | ||| |||| || | |||||| | | || | Sbjct 12094 CCCTGACTGGCTCAGCGCGTGTCTACCCTATGCCGACAGTTGCGGGTAACCCGTTGAACC 12153 Query 225 TCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAA 284 | ||||| ||||||| | |||||||||||| | | |||||||||| || ||||| Sbjct 12154 CCAATCGTGATGGGGATCAGGGATTGCAATTATTACCTGTGAACGAGGAATCCCCAGTAA 12213 Query 285 GCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||| ||||| ||| || ||||||| |||||||||||||||| Sbjct 12214 GCGCGGGTCATAAGCGTGCATTGATTAAGTCCCTGCCCTTTGTA 12257 >seq83 Length=706952 Score = 109 bits (120), Expect = 1e-21 Identities = 84/100 (84%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 229 TCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC 288 ||||| ||||||| | | ||||||||| || | | | |||||||||| ||||||||| || Sbjct 694742 TCGTGATGGGGATCGGGGATTGCAATTTTTCCCCATGAACGAGGAATTCCTAGTAAGTGC 694683 Query 289 GTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | ||||| ||| |||||||||| |||||||||||||||| Sbjct 694682 GGGTCATAAGCTTGCGTTGATTAAGTCCCTGCCCTTTGTA 694643 Score = 78.8 bits (86), Expect = 2e-12 Identities = 49/53 (92%), Gaps = 0/53 (0%) Strand=Plus/Minus Query 115 CAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACAC 167 |||||||||||||||||||||||||||||| | |||| ||||| ||||||||| Sbjct 694635 CAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGTGCGCTACAC 694583 >seq6435 Length=63346 Score = 82.4 bits (90), Expect = 1e-13 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 246 CATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGT 305 ||||||||||||| | | | || ||||||| || |||||| | | | ||| ||| ||| | Sbjct 43905 CATTGCAATTATTCCCCATGAATGAGGAATTCCCAGTAAGTGTGAGCCATAAGCTCGCAT 43964 Query 306 TGATTACGTCCCTGCCCTTTGTA 328 |||||| |||||||||||||||| Sbjct 43965 TGATTAAGTCCCTGCCCTTTGTA 43987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946829521664