Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq2858 342 2e-91 seq2195 251 2e-64 seq11586 248 3e-63 seq5993 248 3e-63 seq9868 226 9e-57 seq3392 172 2e-40 seq15064 158 4e-36 seq24729 147 7e-33 seq1323 120 1e-24 seq337 109 2e-21 seq292 104 8e-20 seq2016 87.8 6e-15 >seq2858 Length=164590 Score = 342 bits (378), Expect = 2e-91 Identities = 310/386 (80%), Gaps = 17/386 (4%) Strand=Plus/Minus Query 69 TTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCG- 127 || |||| ||| ||||||||| ||||||||||||||||| |||| | ||| ||| Sbjct 73607 TTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGACGCTGTCCCCGGAGCGGGTCGC 73548 Query 128 -----GCCCGCGAAGGAC-CTTAACGCCAGAAAATGG------TCGGTGAAGACCAGTTC 175 ||||||| || | ||| ||||||| | |||| | || | Sbjct 73547 GCCCGGCCCGCGCCGGGCGCTTGGAGCCAGAAGCGAGAGCCCCTCGGGGCTCGCCCCC-C 73489 Query 176 CGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG--CCGAAA 233 ||| ||| | ||||| |||||||||| || ||||||||||||||| ||| ||| Sbjct 73488 CGCCTCACCGGGTAAGTGAAAAAACGATCAGAGTAGTGGTATTTCACCGGCGGCCCGGGC 73429 Query 234 CGGC-TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGC 292 ||| ||||||||||||||| ||||||| ||| |||||| | | |||||||||||||| Sbjct 73428 GGGCCTCCCACTTATTCTACGCCTCTCATGTCTCTTCACAGGGCCAGACTAGAGTCAAGC 73369 Query 293 TCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 352 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 73368 TCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 73309 Query 353 CTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTA 412 |||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 73308 CTAGGTAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTA 73249 Query 413 GATGACGAGGCATTTGGCTACCTTAA 438 ||||| |||||||||||||| |||| Sbjct 73248 GATGATGAGGCATTTGGCTATGTTAA 73223 Score = 161 bits (178), Expect = 3e-37 Identities = 101/109 (93%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486 ||| | ||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct 72321 TGGATTCCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGTGCTTCATTGAATTTCT 72262 Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 ||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 72261 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGTATCAACATC 72213 >seq2195 Length=200925 Score = 251 bits (278), Expect = 2e-64 Identities = 289/389 (74%), Gaps = 31/389 (8%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| |||||| | |||| ||||||| |||| |||| | ||| | |||||||| |||| | Sbjct 197173 CTTCTGCTCTGCGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTGAAGACACCTGTGTTACG 197114 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||| ||| | |||||||||||||||||||||||| |||| || ||| Sbjct 197113 GTTTGACAGGTGTACTGCCCCAGCCAAACTCCCCACCTGATGCTGTC-----CCTGGAGT 197059 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 || | || || |||| | || ||||||||| Sbjct 197058 GGGTTG---------TT------------TGTTCGGGGGTCGCCC--TCCGCTTCACCAG 197022 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGC-GCCGAAACGGCTCCC--AC 243 ||||| |||||| ||| || |||| |||||||||| || ||| | | | |||| || Sbjct 197021 GTAAGTGAAAAAATGATCAGAGTAGCGGTATTTCACCAGCAGCCCAGGCAGGTCCCCCAC 196962 Query 244 TTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303 ||||||||||||||||| ||| ||| || | | ||||| ||||| | ||||||||||| Sbjct 196961 TTATTCTACACCTCTCATGTCTCTTCGCAGGGCCAGACTAAAGTCATGTTCAACAGGGTC 196902 Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363 |||||||||| ||||||| ||||||||| || |||||||||||||||| ||||||||||| Sbjct 196901 TTCTTTCCCCACTGATTCTGCCAAGCCCATTACCTTGGCTGTGGTTTCACTAGATAGTAG 196842 Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCA 392 ||||||||||||||||||| || ||||| Sbjct 196841 GTAGGGACAGTGGGAATCTCATTCATCCA 196813 >seq11586 Length=8070 Score = 248 bits (274), Expect = 3e-63 Identities = 142/145 (98%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 288 CAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGG 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8070 CAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGG 8011 Query 348 TTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACT 407 |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct 8010 TTTCGCTAGATAGTAGGGAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACT 7951 Query 408 AATTAGATGACGAGGCATTTGGCTA 432 ||||||||||||||||||||||||| Sbjct 7950 AATTAGATGACGAGGCATTTGGCTA 7926 >seq5993 Length=68124 Score = 248 bits (274), Expect = 3e-63 Identities = 299/400 (75%), Gaps = 15/400 (4%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| |||||| | |||| ||||||| |||| ||| ||||||||||||| ||| ||||| Sbjct 13353 CTTCTGCTCTGCGGGAGGTTTCTGTCCTCCCTGAAATCCCCTTAGGACACATGCTTTATG 13412 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCA-TCAACCCGGAT 125 || | |||| || | ||||||| |||||||||||||||| ||| | | | || | Sbjct 13413 GTGTGGCAGAGGTACTGCCCCAGTCAAACTCCCCACCTGATGCAGTCCCTGGAGCAGGTT 13472 Query 126 C-----GGCCCGCGA-AGGACCTTAACGCCAGAAA--ATGGTCGGTGAAGACCAGTTCCG 177 ||||||| ||| ||| | ||||||| | | | || | | | || Sbjct 13473 GTGCCTGGCCCGCACCAGGTGCTTGAAGCCAGAAGCGAGAGCCCTTGGGG-CTTGCCCCC 13531 Query 178 CT--TCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCC---GAA 232 | |||| ||||| |||||||||| || ||||||||||||||| ||| | | Sbjct 13532 CACCTCATCAGGTAAGTGAAAAAACGATCAGAATAGTGGTATTTCACTAGCGGCCTGGGC 13591 Query 233 ACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGC 292 | | ||||||||||||||| ||||| | ||| |||||| | ||||||| |||||| Sbjct 13592 AGGCCTCCCACTTATTCTATGCCTCTGATGTCTCTTCACAGGGCTAGACTAGAATCAAGC 13651 Query 293 TCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 352 |||||||| ||||||||||||| ||| ||| |||||||| ||||| ||||||||||||| Sbjct 13652 TCAACAGGATCTTCTTTCCCCGTTGAGTCCACCAAGCCCATTCCCCTGGCTGTGGTTTCA 13711 Query 353 CTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCA 392 ||||| ||||| |||||||||||||||||| ||| ||||| Sbjct 13712 CTAGACAGTAGGTAGGGACAGTGGGAATCTTGTTCATCCA 13751 >seq9868 Length=17690 Score = 226 bits (250), Expect = 9e-57 Identities = 131/135 (97%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct 477 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTATGGTTTCGCTCGA 536 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 537 TAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATGA 596 Query 418 CGAGGCATTTGGCTA 432 ||||||||||||||| Sbjct 597 CGAGGCATTTGGCTA 611 Score = 156 bits (172), Expect = 1e-35 Identities = 95/101 (94%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 433 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTT 492 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 4130 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCATTGAATTTCTTCACTT 4189 Query 493 TGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||| |||||||||||||||| |||||| || Sbjct 4190 TGACATTCAGAGCTCTGGGCAGAAATCACACCGCGTCACCA 4230 >seq3392 Length=137693 Score = 172 bits (190), Expect = 2e-40 Identities = 128/150 (85%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338 |||| ||||||||||||||||||||||||||| |||||||| ||||||| ||||||| Sbjct 95334 GACTGGAGTCAAGCTCAACAGGGTCTTCTTTCTTTGCTGATTCTGCCAAGCTGGTTCCCT 95275 Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398 ||| ||||||||| |||||| || |||||||||||||||||| ||| ||| || ||| Sbjct 95274 TGGTTGTGGTTTCATTAGATAACAGGTAGGGACAGTGGGAATCTTGTTCATCTGTTTATG 95215 Query 399 CGCGTCACTAATTAGATGACGAGGCATTTG 428 | ||||||||||||| ||| ||||||||| Sbjct 95214 CATGTCACTAATTAGAAGACAAGGCATTTG 95185 >seq15064 Length=1370 Score = 158 bits (174), Expect = 4e-36 Identities = 99/107 (93%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486 ||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 178 TGGCTTCATTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCATTGAATTTCT 119 Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||| |||| |||||||||| ||||| ||||||||| Sbjct 118 TCACTTTGACATTCAAAGCAGTGGGCAGAAACCACATCGCGTCAACA 72 >seq24729 Length=400 Score = 147 bits (162), Expect = 7e-33 Identities = 92/99 (93%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 |||||||||||||||||||||| || |||||||||||||| |||||||||||||||||| Sbjct 221 TTAAGAGAGTCATAGTTACTCCTGCTGTTTACCCGCGCTTCATTGAATTTCTTCACTTTG 162 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||| |||||| | ||||||||| Sbjct 161 ACATTCAGAGCACTGGGCAGGAATCACGTCGCGTCAACA 123 >seq1323 Length=270932 Score = 120 bits (132), Expect = 1e-24 Identities = 74/79 (94%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 354 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 413 |||| ||||| |||||||||||||||||||||| |||||||||||| | ||||||||||| Sbjct 45508 TAGAGAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCACATCACTAATTAG 45567 Query 414 ATGACGAGGCATTTGGCTA 432 ||||||||||||||||||| Sbjct 45568 ATGACGAGGCATTTGGCTA 45586 Score = 84.2 bits (92), Expect = 7e-14 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 442 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCA 501 ||||||| || ||||||||||| || ||| ||| ||||||||||| ||||||||| Sbjct 48186 AGTCATACGTAGCCCCGCCGTTTAATTGCACTTTATTGCATTTCTTCACTCTGACATTCA 48245 Query 502 GAGCACTGGGCAGAAATCACA 522 || ||||| |||||||||||| Sbjct 48246 GAACACTGAGCAGAAATCACA 48266 >seq337 Length=495713 Score = 109 bits (120), Expect = 2e-21 Identities = 84/100 (84%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| | Sbjct 27593 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACG 27534 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGA 106 || | |||| ||| ||||||||| ||||||||| |||||| Sbjct 27533 GTCTGACAGGTGTACCGCCCCAGTCAAACTCCCTACCTGA 27494 >seq292 Length=512050 Score = 104 bits (114), Expect = 8e-20 Identities = 87/107 (81%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| ||| ||||||| |||| |||| ||||||||||||||| ||||| Sbjct 127309 CTTCTGCTCCGGGGGAAGTTTCTGTCCTCCCTGAGCTTGCCTTAGGACACCTGCATTATG 127368 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 |||| |||||||| | |||||| ||||||||||||||||| ||||| Sbjct 127369 GTTTGACAGATGTACTGCCCCATTCAAACTCCCCACCTGACGATGTC 127415 >seq2016 Length=213366 Score = 87.8 bits (96), Expect = 6e-15 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 466 CCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTG 525 ||||| ||| |||||||||||||||||||||||||| ||||||| ||||||||||| | Sbjct 51977 CCCGCACTTCACTGAATTTCTTCACTTTGACATTCAGACCACTGGGTAGAAATCACATCG 52036 Query 526 CGTCAACA 533 | |||||| Sbjct 52037 CATCAACA 52044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634560424224