Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15]
39,113 sequences; 1,435,052,152 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq4512 289 9e-76
seq6574 172 2e-40
seq921 107 6e-21
seq1289 100 9e-19
seq263 93.3 1e-16
>seq4512
Length=104324
Score = 289 bits (320), Expect = 9e-76
Identities = 358/477 (75%), Gaps = 17/477 (4%)
Strand=Plus/Plus
Query 40 CAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCT 99
|||| ||| | ||||||||||||||| || ||| |||||||||||| |||||||||||
Sbjct 1834 CAGTCTTT-TCGTCACTACCTCCCCGCTTCAGGAGTGGGTAATTTGCATGCCTGCTGCCT 1892
Query 100 TCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCG 159
|||||||||| ||||||||||||||||| ||||||||| |||||||||||| ||||||
Sbjct 1893 TCCTTGGATGCGGTAGCCGTTTCTCAGGGTCCCTCTCCAGAATCGAACCCTGATTCCCAA 1952
Query 160 TTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAAT 219
|||||| | | |||||||||||| | ||||||||||||||||||||||||| |
Sbjct 1953 TTACCCATGGTCACCATGGTAGGCGCAGAAAGTACCATCGAAAGTTGATAGGGCAGATGT 2012
Query 220 TTGAATGAACCATCGCCGGCTCAAGGCCATGCGATT--CGTTAAGTTATTATGAATCACC 277
| |||| | ||| | || || ||||||| | | ||||| || |||||
Sbjct 2013 TCAAATGTGTTGTTGCCACCACAGGGGAGTGCGATTGGCCCGAGGTTATCTAGAGTCACC 2072
Query 278 -AAGGAGCCCCGAAGGGC----GTTGGTTTTTTATCTAATAAATACACCCCTTCC--GAA 330
||| || | | || ||||| |||| ||| |||||| || | | || ||
Sbjct 2073 AAAGCTGCTGGGGCGAGCTCGGGTTGG-TTTTGGTCTGATAAATGCAAGCATCCCTGGAG 2131
Query 331 GTC-GGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCAT-GTAGTAAGG 388
|| | | | | |||||||||||||||||||||||| | |||| || | ||| ||
Sbjct 2132 ATCAGCGCTCGTCGGCATGTATTAGCTCTAGAATTACCTCAGTTAACCCTAACAGT--GG 2189
Query 389 TACT-ATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT 447
| | | |||| || |||||||||||||||| ||||| |||||||||||| |
Sbjct 2190 GAGTGACCAAAGGAATCATAACTGATTTAATGATCCATTTGCAGTTTCACTGCCACGCCC 2249
Query 448 GCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
| ||||||||||||||| |||||||||||||||||||||||| ||||||||||
Sbjct 2250 ATGTGTACTTAGACATGCATCACTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 2305
>seq6574
Length=58403
Score = 172 bits (190), Expect = 2e-40
Identities = 191/253 (75%), Gaps = 19/253 (8%)
Strand=Plus/Plus
Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
|||||||||||||||| | || ||||||| |||| || ||||| |||||||||||||
Sbjct 18448 ACTCATTCCAATTACAGGGCCTCAAAAGAATCCTGCAT---TATTTTTTGTCACTACCTC 18504
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121
|||| |||| | ||||||||||| | |||||||||||| |||| ||||||||||| |||
Sbjct 18505 CCCGCATCGGAAGTGGGTAATTTGTGTGCCTGCTGCCTTTCTTGTATGTGGTAGCCATTT 18564
Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181
|| ||||||||| | || || || || |||| |||||| |||||||
Sbjct 18565 CTTAGGCTCCCTTCTCTGATTC-----CTGAT-CCCCATTACCC---------ATGGTAG 18609
Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241
| | ||||||| ||||||||||||||||| ||||||||| ||| ||| | |
Sbjct 18610 GTGCAGAAATTACCATCAAAAGTTGATAGGGCAGACATTTGAATGCGTCATTGCCACCAC 18669
Query 242 AAGGCCATGCGAT 254
| || |||| |||
Sbjct 18670 AGGGGCATGTGAT 18682
>seq921
Length=332490
Score = 107 bits (118), Expect = 6e-21
Identities = 118/153 (77%), Gaps = 8/153 (5%)
Strand=Plus/Plus
Query 343 AGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAA----GGTACT-ATCAA 397
|||||||||||| |||||||||| ||| | | || || | ||| || ||| | ||
Sbjct 163007 AGCATGTATTAGGTCTAGAATTATCACAGATTTC--TG-ACTAATGGTGGGACTGACCAC 163063
Query 398 ATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTT 457
| |||| ||| |||||||||| |||||||| ||||| |||||| || ||||||
Sbjct 163064 AGAAACCATAGCTGATTTAATCAGCCATTCACAGTTACACTGTCAAGGCCCTGTATACTC 163123
Query 458 AGACATGCATGGCTTAATCTTTGAGACAAGCAT 490
||||| ||||||||||||||||||| ||||||
Sbjct 163124 AGACAAGCATGGCTTAATCTTTGAGGGAAGCAT 163156
>seq1289
Length=274916
Score = 100 bits (110), Expect = 9e-19
Identities = 112/146 (77%), Gaps = 3/146 (2%)
Strand=Plus/Minus
Query 92 TGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTA 151
||| | ||||||||||| | ||| | ||||||||||||||||| | |||| ||| |
Sbjct 166995 TGCCGTCTTCCTTGGAT-TAATAGTCAGTTCTCAGGCTCCCTCTCTGAAATCAAACTGTG 166937
Query 152 ATTCCCCGTTACCCGTTGATACCATGGTAGGCCACT-ATCCTACCATCGAAAGTTGATAG 210
||| ||||| |||| | | |||||| || | |||| | |||||| |||| ||||||
Sbjct 166936 ATTACCCGTGACCCATGGTCACCATGATAAG-CACTGAAAGTACCATTGAAAATTGATAA 166878
Query 211 GGCAGAAATTTGAATGAACCATCGCC 236
|||||| ||||||||| ||| | |||
Sbjct 166877 GGCAGACATTTGAATGCACCGTTGCC 166852
>seq263
Length=531419
Score = 93.3 bits (102), Expect = 1e-16
Identities = 104/138 (75%), Gaps = 11/138 (8%)
Strand=Plus/Plus
Query 358 TAGAATTACCACGGTTATCCATGTAGTAA--GGTACTATCAAATAAACGATAACTGATTT 415
|||||||||||| ||||||| ||| | || | | |||| ||| ||||| | | |
Sbjct 520815 TAGAATTACCACAATTATCCAAGTAATGGTGGGAAAAACCAAAGGAACCATAACAGCTCT 520874
Query 416 AATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAAT 475
||||| | ||| ||||||| ||| ||| | |||||||||| ||||||||||||
Sbjct 520875 AATGAACTATTTGCAGTTTTACT-------TTG--TGTACTTAGACACGCATGGCTTAAT 520925
Query 476 CTTTGAGACAAGCATATG 493
|||||||||||||||||
Sbjct 520926 TTTTGAGACAAGCATATG 520943
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1509809237248
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |