Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq4512 289 9e-76 seq6574 172 2e-40 seq921 107 6e-21 seq1289 100 9e-19 seq263 93.3 1e-16 >seq4512 Length=104324 Score = 289 bits (320), Expect = 9e-76 Identities = 358/477 (75%), Gaps = 17/477 (4%) Strand=Plus/Plus Query 40 CAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCT 99 |||| ||| | ||||||||||||||| || ||| |||||||||||| ||||||||||| Sbjct 1834 CAGTCTTT-TCGTCACTACCTCCCCGCTTCAGGAGTGGGTAATTTGCATGCCTGCTGCCT 1892 Query 100 TCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCG 159 |||||||||| ||||||||||||||||| ||||||||| |||||||||||| |||||| Sbjct 1893 TCCTTGGATGCGGTAGCCGTTTCTCAGGGTCCCTCTCCAGAATCGAACCCTGATTCCCAA 1952 Query 160 TTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAAT 219 |||||| | | |||||||||||| | ||||||||||||||||||||||||| | Sbjct 1953 TTACCCATGGTCACCATGGTAGGCGCAGAAAGTACCATCGAAAGTTGATAGGGCAGATGT 2012 Query 220 TTGAATGAACCATCGCCGGCTCAAGGCCATGCGATT--CGTTAAGTTATTATGAATCACC 277 | |||| | ||| | || || ||||||| | | ||||| || ||||| Sbjct 2013 TCAAATGTGTTGTTGCCACCACAGGGGAGTGCGATTGGCCCGAGGTTATCTAGAGTCACC 2072 Query 278 -AAGGAGCCCCGAAGGGC----GTTGGTTTTTTATCTAATAAATACACCCCTTCC--GAA 330 ||| || | | || ||||| |||| ||| |||||| || | | || || Sbjct 2073 AAAGCTGCTGGGGCGAGCTCGGGTTGG-TTTTGGTCTGATAAATGCAAGCATCCCTGGAG 2131 Query 331 GTC-GGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCAT-GTAGTAAGG 388 || | | | | |||||||||||||||||||||||| | |||| || | ||| || Sbjct 2132 ATCAGCGCTCGTCGGCATGTATTAGCTCTAGAATTACCTCAGTTAACCCTAACAGT--GG 2189 Query 389 TACT-ATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT 447 | | | |||| || |||||||||||||||| ||||| |||||||||||| | Sbjct 2190 GAGTGACCAAAGGAATCATAACTGATTTAATGATCCATTTGCAGTTTCACTGCCACGCCC 2249 Query 448 GCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 | ||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct 2250 ATGTGTACTTAGACATGCATCACTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 2305 >seq6574 Length=58403 Score = 172 bits (190), Expect = 2e-40 Identities = 191/253 (75%), Gaps = 19/253 (8%) Strand=Plus/Plus Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||||||||||||| | || ||||||| |||| || ||||| ||||||||||||| Sbjct 18448 ACTCATTCCAATTACAGGGCCTCAAAAGAATCCTGCAT---TATTTTTTGTCACTACCTC 18504 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 |||| |||| | ||||||||||| | |||||||||||| |||| ||||||||||| ||| Sbjct 18505 CCCGCATCGGAAGTGGGTAATTTGTGTGCCTGCTGCCTTTCTTGTATGTGGTAGCCATTT 18564 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 || ||||||||| | || || || || |||| |||||| ||||||| Sbjct 18565 CTTAGGCTCCCTTCTCTGATTC-----CTGAT-CCCCATTACCC---------ATGGTAG 18609 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 | | ||||||| ||||||||||||||||| ||||||||| ||| ||| | | Sbjct 18610 GTGCAGAAATTACCATCAAAAGTTGATAGGGCAGACATTTGAATGCGTCATTGCCACCAC 18669 Query 242 AAGGCCATGCGAT 254 | || |||| ||| Sbjct 18670 AGGGGCATGTGAT 18682 >seq921 Length=332490 Score = 107 bits (118), Expect = 6e-21 Identities = 118/153 (77%), Gaps = 8/153 (5%) Strand=Plus/Plus Query 343 AGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAA----GGTACT-ATCAA 397 |||||||||||| |||||||||| ||| | | || || | ||| || ||| | || Sbjct 163007 AGCATGTATTAGGTCTAGAATTATCACAGATTTC--TG-ACTAATGGTGGGACTGACCAC 163063 Query 398 ATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTT 457 | |||| ||| |||||||||| |||||||| ||||| |||||| || |||||| Sbjct 163064 AGAAACCATAGCTGATTTAATCAGCCATTCACAGTTACACTGTCAAGGCCCTGTATACTC 163123 Query 458 AGACATGCATGGCTTAATCTTTGAGACAAGCAT 490 ||||| ||||||||||||||||||| |||||| Sbjct 163124 AGACAAGCATGGCTTAATCTTTGAGGGAAGCAT 163156 >seq1289 Length=274916 Score = 100 bits (110), Expect = 9e-19 Identities = 112/146 (77%), Gaps = 3/146 (2%) Strand=Plus/Minus Query 92 TGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTA 151 ||| | ||||||||||| | ||| | ||||||||||||||||| | |||| ||| | Sbjct 166995 TGCCGTCTTCCTTGGAT-TAATAGTCAGTTCTCAGGCTCCCTCTCTGAAATCAAACTGTG 166937 Query 152 ATTCCCCGTTACCCGTTGATACCATGGTAGGCCACT-ATCCTACCATCGAAAGTTGATAG 210 ||| ||||| |||| | | |||||| || | |||| | |||||| |||| |||||| Sbjct 166936 ATTACCCGTGACCCATGGTCACCATGATAAG-CACTGAAAGTACCATTGAAAATTGATAA 166878 Query 211 GGCAGAAATTTGAATGAACCATCGCC 236 |||||| ||||||||| ||| | ||| Sbjct 166877 GGCAGACATTTGAATGCACCGTTGCC 166852 >seq263 Length=531419 Score = 93.3 bits (102), Expect = 1e-16 Identities = 104/138 (75%), Gaps = 11/138 (8%) Strand=Plus/Plus Query 358 TAGAATTACCACGGTTATCCATGTAGTAA--GGTACTATCAAATAAACGATAACTGATTT 415 |||||||||||| ||||||| ||| | || | | |||| ||| ||||| | | | Sbjct 520815 TAGAATTACCACAATTATCCAAGTAATGGTGGGAAAAACCAAAGGAACCATAACAGCTCT 520874 Query 416 AATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAAT 475 ||||| | ||| ||||||| ||| ||| | |||||||||| |||||||||||| Sbjct 520875 AATGAACTATTTGCAGTTTTACT-------TTG--TGTACTTAGACACGCATGGCTTAAT 520925 Query 476 CTTTGAGACAAGCATATG 493 ||||||||||||||||| Sbjct 520926 TTTTGAGACAAGCATATG 520943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1509809237248