Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thamnophis_20sirtalis_20[refseq_20GCF_5F001077635.1_202015-06-26] 7,930 sequences; 1,424,897,867 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq714 116 6e-24 >seq714 Length=591541 Score = 116 bits (128), Expect = 6e-24 Identities = 170/232 (73%), Gaps = 14/232 (6%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || |||| || ||||| || || | |||||| ||||| | Sbjct 377516 GTACAAAGGGCAGGGACTTAATCAATGCAAGCTT-ATAACCTGTACTTACTGAGAATT-C 377459 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT----TTCAA-A 115 ||| || | | || ||||||||| | |||||||||| ||||| ||||| | Sbjct 377458 CTCATTCATGGGGAATAATTGCAATCCCCGATCCCCATCA----GAAATGGGGTTCAACA 377403 Query 116 GATTACCCGGACCTGTCGGCC-AAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGC 174 | ||||| | ||||||| || ||||| | | || | ||| |||||||||| || Sbjct 377402 GGTTACCTGCACCTGTCAGCATAAGGT-AGACACACACTGAGCCAGTCAGTGTAGCATGC 377344 Query 175 GTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTT 226 ||| ||| | |||||||||||||| | ||| ||||||||| ||||| ||| Sbjct 377343 ATGCATCCCCGGACATCTAAGGGCATTAAAGATCTGTTATTG-CTCAATCTT 377293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751942229950