Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thamnophis_20sirtalis_20[refseq_20GCF_5F001077635.1_202015-06-26] 7,930 sequences; 1,424,897,867 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 6e-18 seq2372 82.4 4e-14 >seq1 Length=3920154 Score = 95.1 bits (104), Expect = 6e-18 Identities = 81/100 (81%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 3 AAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCC 62 ||||||||||||||||||||| ||| |||||| ||||||| ||||||||||||||| Sbjct 2253082 AAAAGAAACTAACCAGGATTCTTTCAATAACGGTGAGTGAAGAGGGAAGAGCCCAGCATT 2253141 Query 63 GAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||| || ||| | ||||||| |||| || || |||| Sbjct 2253142 TAATCTCCACCCTACAGTGGGGCAAGGGAAATCTGACGTA 2253181 >seq2372 Length=142157 Score = 82.4 bits (90), Expect = 4e-14 Identities = 77/96 (80%), Gaps = 8/96 (8%) Strand=Plus/Plus Query 5 AAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGA 64 || |||||| |||||||||||||| |||| | ||| |||||||||||||| |||| Sbjct 135220 AAAAAACTA-CCAGGATTCCCTCAATAAC----AATGA---GGGAAGAGCCCAGCACCGA 135271 Query 65 ATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCG 100 |||||| |||| ||||||| |||| |||||||| Sbjct 135272 ATCCCCATCCCGTGGTGGGGTATGGGAAATGTGGCG 135307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230382871200