Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thamnophis_20sirtalis_20[refseq_20GCF_5F001077635.1_202015-06-26]
7,930 sequences; 1,424,897,867 total letters
Query= AAMG01000750.1
Length=102
Score E
Sequences producing significant alignments: (Bits) Value
seq1 95.1 6e-18
seq2372 82.4 4e-14
>seq1
Length=3920154
Score = 95.1 bits (104), Expect = 6e-18
Identities = 81/100 (81%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 3 AAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCC 62
||||||||||||||||||||| ||| |||||| ||||||| |||||||||||||||
Sbjct 2253082 AAAAGAAACTAACCAGGATTCTTTCAATAACGGTGAGTGAAGAGGGAAGAGCCCAGCATT 2253141
Query 63 GAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
|||| || ||| | ||||||| |||| || || ||||
Sbjct 2253142 TAATCTCCACCCTACAGTGGGGCAAGGGAAATCTGACGTA 2253181
>seq2372
Length=142157
Score = 82.4 bits (90), Expect = 4e-14
Identities = 77/96 (80%), Gaps = 8/96 (8%)
Strand=Plus/Plus
Query 5 AAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGA 64
|| |||||| |||||||||||||| |||| | ||| |||||||||||||| ||||
Sbjct 135220 AAAAAACTA-CCAGGATTCCCTCAATAAC----AATGA---GGGAAGAGCCCAGCACCGA 135271
Query 65 ATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCG 100
|||||| |||| ||||||| |||| ||||||||
Sbjct 135272 ATCCCCATCCCGTGGTGGGGTATGGGAAATGTGGCG 135307
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 230382871200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |