Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thamnophis_20sirtalis_20[refseq_20GCF_5F001077635.1_202015-06-26]
7,930 sequences; 1,424,897,867 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq570 78.8 1e-12
>seq570
Length=683497
Score = 78.8 bits (86), Expect = 1e-12
Identities = 120/163 (74%), Gaps = 6/163 (4%)
Strand=Plus/Plus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
|||||||||||| || || | ||||||||| |||||||| ||| |||||| || |
Sbjct 38782 AAACCAACAAAAAAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGGAGTATTCTGGTG 38840
Query 70 TAAG-CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCACAC 128
| ||||||||||||| ||||||||| |||| ||||| | ||| || | ||||
Sbjct 38841 ACCGGCCTGCTTTGAACATTCTAATTTTTTCAAAGTAAATGCTTTGGACCCATGGGACAC 38900
Query 129 -CAATGAAG-GCA-TACGGGCTCACCAAGAGGTA-GGGCTGGG 167
|||| ||| ||| | ||| | || ||||| | ||||||||
Sbjct 38901 TCAATTAAGAGCATTGGGGGAGCGCCGAGAGGCAGGGGCTGGG 38943
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595154275620
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |