Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thamnophis_20sirtalis_20[refseq_20GCF_5F001077635.1_202015-06-26] 7,930 sequences; 1,424,897,867 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq570 78.8 1e-12 >seq570 Length=683497 Score = 78.8 bits (86), Expect = 1e-12 Identities = 120/163 (74%), Gaps = 6/163 (4%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||||||||| || || | ||||||||| |||||||| ||| |||||| || | Sbjct 38782 AAACCAACAAAAAAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGGAGTATTCTGGTG 38840 Query 70 TAAG-CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCACAC 128 | ||||||||||||| ||||||||| |||| ||||| | ||| || | |||| Sbjct 38841 ACCGGCCTGCTTTGAACATTCTAATTTTTTCAAAGTAAATGCTTTGGACCCATGGGACAC 38900 Query 129 -CAATGAAG-GCA-TACGGGCTCACCAAGAGGTA-GGGCTGGG 167 |||| ||| ||| | ||| | || ||||| | |||||||| Sbjct 38901 TCAATTAAGAGCATTGGGGGAGCGCCGAGAGGCAGGGGCTGGG 38943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595154275620