Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thamnophis_20sirtalis_20[refseq_20GCF_5F001077635.1_202015-06-26]
7,930 sequences; 1,424,897,867 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq30 131 5e-28
seq543 86.0 2e-14
>seq30
Length=1990369
Score = 131 bits (144), Expect = 5e-28
Identities = 87/97 (90%), Gaps = 0/97 (0%)
Strand=Plus/Minus
Query 51 GTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGT 110
||| ||||||||| | || ||| ||||||| |||| ||||||||||||||||||||||
Sbjct 233472 GTCCCTACCTCCCTGCATCAGGAGTGGGTAAGTTGCATGCCTGCTGCCTTCCTTGGATGT 233413
Query 111 GGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAAC 147
||||||||||||||||||||||||||| |||||||||
Sbjct 233412 GGTAGCCGTTTCTCAGGCTCCCTCTCCAGAATCGAAC 233376
>seq543
Length=700412
Score = 86.0 bits (94), Expect = 2e-14
Identities = 51/52 (98%), Gaps = 1/52 (2%)
Strand=Plus/Plus
Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 495300 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 495350
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510280225280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |