Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vipera_20berus_20berus_20[genbank_20GCA_5F000800605.1_202014-12-10]
28,883 sequences; 1,532,390,814 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq25996 136 2e-29
seq6019 136 2e-29
seq25952 134 6e-29
seq8279 127 9e-27
seq663 127 9e-27
seq23664 91.5 6e-16
>seq25996
Length=554908
Score = 136 bits (150), Expect = 2e-29
Identities = 107/128 (84%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608
||| | |||||| || | |||||||||||||||||||||||||||| |||| ||||
Sbjct 247405 GAGCATGAGCATGCGTGCTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAG 247346
Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668
|||||||||||||||||||||| || |||||||||| ||||||||| | || || ||
Sbjct 247345 CCAGAGGAAACTCTGGTGGAGGTCCGTAGCGGTTCTGACGTGCAAATTGGTCATCCAACC 247286
Query 669 TGGGTATA 676
||||||||
Sbjct 247285 TGGGTATA 247278
>seq6019
Length=17252
Score = 136 bits (150), Expect = 2e-29
Identities = 99/115 (86%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628
|||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct 8068 GGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGA 8127
Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|| || |||||| ||| |||||||||| || || | |||||||||||||||
Sbjct 8128 GGTCCGTAGCGGTCCTGATGTGCAAATCGGTCATCCGACCTGGGTATAGGGGCGA 8182
>seq25952
Length=264059
Score = 134 bits (148), Expect = 6e-29
Identities = 107/129 (83%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614
||||| | || | |||||| ||||||||||||||||||||| |||| ||||||| ||
Sbjct 108740 GAGCACGGGTGCTAGGACCCAAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAAAG 108681
Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674
|||||||||||||||| | |||||| ||| ||||||||||| ||||| | ||||||
Sbjct 108680 GAAACTCTGGTGGAGGTCTGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTA 108621
Query 675 TAGGGGCGA 683
|||||||||
Sbjct 108620 TAGGGGCGA 108612
>seq8279
Length=12561
Score = 127 bits (140), Expect = 9e-27
Identities = 97/115 (84%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628
|||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct 10595 GGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGA 10536
Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|| || ||| || ||| |||||||||| | ||| | |||||||||||| ||
Sbjct 10535 GGTCCGTAGCAGTCCTGATGTGCAAATCGGTTGTCCGACCTGGGTATAGGGGAGA 10481
>seq663
Length=40635
Score = 127 bits (140), Expect = 9e-27
Identities = 97/115 (84%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628
|||||||||||||||||||||||||||| | |||| |||||||||||||| |||||||||
Sbjct 20223 GGACCCGAAAGATGGTGAACTATGCCTGGACAGGGCGAAGCCAGAGGAAAATCTGGTGGA 20164
Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|| || || ||| ||| | ||||||||| || || | |||||||||||| ||
Sbjct 20163 GGTCCGTAGAGGTCCTGACATGCAAATCGGTCATCCGACCTGGGTATAGGGGAGA 20109
>seq23664
Length=296130
Score = 91.5 bits (100), Expect = 6e-16
Identities = 73/88 (83%), Gaps = 0/88 (0%)
Strand=Plus/Plus
Query 576 AAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGC 635
||||||||||||||||||||| |||| |||||||||||||||||||||||||| |
Sbjct 159046 AAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGAGGTCTGT 159105
Query 636 AGCGGTTCTGGCGTGCAAATCGATCGTC 663
|| | ||| |||||||||| |||||
Sbjct 159106 AGAAATCCTGATGTGCAAATCGGTCGTC 159133
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079380459650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |