Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vipera_20berus_20berus_20[genbank_20GCA_5F000800605.1_202014-12-10] 28,883 sequences; 1,532,390,814 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq25996 136 2e-29 seq6019 136 2e-29 seq25952 134 6e-29 seq8279 127 9e-27 seq663 127 9e-27 seq23664 91.5 6e-16 >seq25996 Length=554908 Score = 136 bits (150), Expect = 2e-29 Identities = 107/128 (84%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608 ||| | |||||| || | |||||||||||||||||||||||||||| |||| |||| Sbjct 247405 GAGCATGAGCATGCGTGCTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAG 247346 Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668 |||||||||||||||||||||| || |||||||||| ||||||||| | || || || Sbjct 247345 CCAGAGGAAACTCTGGTGGAGGTCCGTAGCGGTTCTGACGTGCAAATTGGTCATCCAACC 247286 Query 669 TGGGTATA 676 |||||||| Sbjct 247285 TGGGTATA 247278 >seq6019 Length=17252 Score = 136 bits (150), Expect = 2e-29 Identities = 99/115 (86%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct 8068 GGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGA 8127 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || || |||||| ||| |||||||||| || || | ||||||||||||||| Sbjct 8128 GGTCCGTAGCGGTCCTGATGTGCAAATCGGTCATCCGACCTGGGTATAGGGGCGA 8182 >seq25952 Length=264059 Score = 134 bits (148), Expect = 6e-29 Identities = 107/129 (83%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 ||||| | || | |||||| ||||||||||||||||||||| |||| ||||||| || Sbjct 108740 GAGCACGGGTGCTAGGACCCAAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAAAG 108681 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 |||||||||||||||| | |||||| ||| ||||||||||| ||||| | |||||| Sbjct 108680 GAAACTCTGGTGGAGGTCTGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTA 108621 Query 675 TAGGGGCGA 683 ||||||||| Sbjct 108620 TAGGGGCGA 108612 >seq8279 Length=12561 Score = 127 bits (140), Expect = 9e-27 Identities = 97/115 (84%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct 10595 GGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGA 10536 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || || ||| || ||| |||||||||| | ||| | |||||||||||| || Sbjct 10535 GGTCCGTAGCAGTCCTGATGTGCAAATCGGTTGTCCGACCTGGGTATAGGGGAGA 10481 >seq663 Length=40635 Score = 127 bits (140), Expect = 9e-27 Identities = 97/115 (84%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||||||||||||||||||||||||| | |||| |||||||||||||| ||||||||| Sbjct 20223 GGACCCGAAAGATGGTGAACTATGCCTGGACAGGGCGAAGCCAGAGGAAAATCTGGTGGA 20164 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || || || ||| ||| | ||||||||| || || | |||||||||||| || Sbjct 20163 GGTCCGTAGAGGTCCTGACATGCAAATCGGTCATCCGACCTGGGTATAGGGGAGA 20109 >seq23664 Length=296130 Score = 91.5 bits (100), Expect = 6e-16 Identities = 73/88 (83%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 576 AAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGC 635 ||||||||||||||||||||| |||| |||||||||||||||||||||||||| | Sbjct 159046 AAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGAGGTCTGT 159105 Query 636 AGCGGTTCTGGCGTGCAAATCGATCGTC 663 || | ||| |||||||||| ||||| Sbjct 159106 AGAAATCCTGATGTGCAAATCGGTCGTC 159133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079380459650