Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vipera_20berus_20berus_20[genbank_20GCA_5F000800605.1_202014-12-10] 28,883 sequences; 1,532,390,814 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq3422 217 3e-54 seq24583 140 6e-31 seq21697 96.9 6e-18 seq23309 86.0 1e-14 seq22435 82.4 1e-13 >seq3422 Length=27631 Score = 217 bits (240), Expect = 3e-54 Identities = 135/145 (93%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 |||||||||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct 18735 ATTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCG 18676 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 |||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||| Sbjct 18675 ACATCGAAGGATCAAAAAGCGATGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATC 18616 Query 210 CCTGTGGTAACTTTTCTGGCACCTC 234 |||||||||||||||||| |||||| Sbjct 18615 CCTGTGGTAACTTTTCTGACACCTC 18591 >seq24583 Length=79939 Score = 140 bits (154), Expect = 6e-31 Identities = 94/105 (90%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 43 TAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAA 102 |||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 40186 TAAAACTAGCTTGTCTCATGACGGTCTAATCCCAGCTCACGTTCCCTATTAGTGGGTGAA 40127 Query 103 CAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGC 147 |||||||| ||| |||||||||||| |||||||||||||| Sbjct 40126 TAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGC 40082 >seq21697 Length=343614 Score = 96.9 bits (106), Expect = 6e-18 Identities = 72/84 (86%), Gaps = 4/84 (5%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 |||||| || ||||||| ||||||||| | ||| | |||||||||||||||||| ||||| Sbjct 109023 CATCAGAAGAGTAAAACCAACCTGTCTTACGACAGCCTAAACCCAGCTCACGTTTCCTAT 109082 Query 92 T----AGTGGGTGAACAATCCAAC 111 | ||||||||||||||||||| Sbjct 109083 TAGTGAGTGGGTGAACAATCCAAC 109106 >seq23309 Length=93687 Score = 86.0 bits (94), Expect = 1e-14 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 ||||| |||||||||||| || ||| |||||||||||| |||||||||||||||| Sbjct 36341 ATTAGCGGGTGAACAATCGGACACTTGGTGAATTCTGCTTCAAAATGATAGGAAGAGCCG 36282 Query 150 ACATCGAAGGATCAA 164 |||| |||||||||| Sbjct 36281 ACATTGAAGGATCAA 36267 >seq22435 Length=106619 Score = 82.4 bits (90), Expect = 1e-13 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 |||||||| |||||||||||||||||||| |||||||||| ||||| | ||||||||| Sbjct 4421 CATCAGTAAGGTAAAACTAACCTGTCTCACGACGGTCTAATCCCAGTTGACGTTCCCT 4364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854153223648