Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vipera_20berus_20berus_20[genbank_20GCA_5F000800605.1_202014-12-10]
28,883 sequences; 1,532,390,814 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq3422 217 3e-54
seq24583 140 6e-31
seq21697 96.9 6e-18
seq23309 86.0 1e-14
seq22435 82.4 1e-13
>seq3422
Length=27631
Score = 217 bits (240), Expect = 3e-54
Identities = 135/145 (93%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149
|||||||||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct 18735 ATTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCG 18676
Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209
|||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||
Sbjct 18675 ACATCGAAGGATCAAAAAGCGATGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATC 18616
Query 210 CCTGTGGTAACTTTTCTGGCACCTC 234
|||||||||||||||||| ||||||
Sbjct 18615 CCTGTGGTAACTTTTCTGACACCTC 18591
>seq24583
Length=79939
Score = 140 bits (154), Expect = 6e-31
Identities = 94/105 (90%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 43 TAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAA 102
|||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 40186 TAAAACTAGCTTGTCTCATGACGGTCTAATCCCAGCTCACGTTCCCTATTAGTGGGTGAA 40127
Query 103 CAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGC 147
|||||||| ||| |||||||||||| ||||||||||||||
Sbjct 40126 TAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGC 40082
>seq21697
Length=343614
Score = 96.9 bits (106), Expect = 6e-18
Identities = 72/84 (86%), Gaps = 4/84 (5%)
Strand=Plus/Plus
Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91
|||||| || ||||||| ||||||||| | ||| | |||||||||||||||||| |||||
Sbjct 109023 CATCAGAAGAGTAAAACCAACCTGTCTTACGACAGCCTAAACCCAGCTCACGTTTCCTAT 109082
Query 92 T----AGTGGGTGAACAATCCAAC 111
| |||||||||||||||||||
Sbjct 109083 TAGTGAGTGGGTGAACAATCCAAC 109106
>seq23309
Length=93687
Score = 86.0 bits (94), Expect = 1e-14
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149
||||| |||||||||||| || ||| |||||||||||| ||||||||||||||||
Sbjct 36341 ATTAGCGGGTGAACAATCGGACACTTGGTGAATTCTGCTTCAAAATGATAGGAAGAGCCG 36282
Query 150 ACATCGAAGGATCAA 164
|||| ||||||||||
Sbjct 36281 ACATTGAAGGATCAA 36267
>seq22435
Length=106619
Score = 82.4 bits (90), Expect = 1e-13
Identities = 53/58 (91%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89
|||||||| |||||||||||||||||||| |||||||||| ||||| | |||||||||
Sbjct 4421 CATCAGTAAGGTAAAACTAACCTGTCTCACGACGGTCTAATCCCAGTTGACGTTCCCT 4364
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854153223648
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |