Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vipera_20berus_20berus_20[genbank_20GCA_5F000800605.1_202014-12-10] 28,883 sequences; 1,532,390,814 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq17815 91.5 2e-16 seq12081 75.2 1e-11 >seq17815 Length=155111 Score = 91.5 bits (100), Expect = 2e-16 Identities = 81/99 (82%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||||||| |||||||| ||| |||||| |||| Sbjct 128510 AAACCAACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGGAGTATTCCGGCG 128568 Query 70 TAAG-CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | ||||||||||||||||||||||| |||| ||||| Sbjct 128569 ACCGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 128607 >seq12081 Length=166231 Score = 75.2 bits (82), Expect = 1e-11 Identities = 79/101 (78%), Gaps = 6/101 (6%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| | | ||||||||| ||||| || ||| |||||| || Sbjct 57010 AAACCAACAAAATAGAACTGGA-GTCCTATTCCATTATCCCTAGCTGGAGTATTCCAGC- 57067 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 || |||||||||||||||||||||||| |||| ||||| Sbjct 57068 -AACTGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 57107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595033460622