Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vipera_20berus_20berus_20[genbank_20GCA_5F000800605.1_202014-12-10]
28,883 sequences; 1,532,390,814 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq17815 102 8e-20
seq12081 100 3e-19
>seq17815
Length=155111
Score = 102 bits (112), Expect = 8e-20
Identities = 132/177 (75%), Gaps = 9/177 (5%)
Strand=Plus/Minus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC-TTTGCTCGAATACATTACCATGG 71
||||||||||||||||||||| |||||||||||||| | || |||||| | | ||
Sbjct 128607 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCGGTCGCCGGAATACTCCAGCTAGG 128548
Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131
|||||| ||||||||| | |||||||||||||| ||||| | ||| | | |||||
Sbjct 128547 AATAATGGAATAGGAC-TCCGGTTCTATTTTGTTGGTTT-TCGGAACCGGGGCCATGATT 128490
Query 132 AATACGGATAGTCGGGGGTGTCAGTATT---CAATTGTCAAAGGTGAAATTCTTGGA 185
|| ||| || |||||| | ||||| | | | | | ||||||||||||||
Sbjct 128489 AAGTGGGACAGCCGGGGGCATTCGTATTGTGCCACT---AGACGTGAAATTCTTGGA 128436
>seq12081
Length=166231
Score = 100 bits (110), Expect = 3e-19
Identities = 83/99 (84%), Gaps = 2/99 (2%)
Strand=Plus/Minus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC-TTTGCTCGAATACATTACCATGG 71
||||||||||||||||||||| |||||||||||||| ||||| |||||| | | ||
Sbjct 57107 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCAGTTGCTGGAATACTCCAGCTAGG 57048
Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110
||||| ||||||||| | | |||||||||||| |||||
Sbjct 57047 GATAATGGAATAGGAC-TCCAGTTCTATTTTGTTGGTTT 57010
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511856740320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |