Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vipera_20berus_20berus_20[genbank_20GCA_5F000800605.1_202014-12-10] 28,883 sequences; 1,532,390,814 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq17815 102 8e-20 seq12081 100 3e-19 >seq17815 Length=155111 Score = 102 bits (112), Expect = 8e-20 Identities = 132/177 (75%), Gaps = 9/177 (5%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC-TTTGCTCGAATACATTACCATGG 71 ||||||||||||||||||||| |||||||||||||| | || |||||| | | || Sbjct 128607 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCGGTCGCCGGAATACTCCAGCTAGG 128548 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131 |||||| ||||||||| | |||||||||||||| ||||| | ||| | | ||||| Sbjct 128547 AATAATGGAATAGGAC-TCCGGTTCTATTTTGTTGGTTT-TCGGAACCGGGGCCATGATT 128490 Query 132 AATACGGATAGTCGGGGGTGTCAGTATT---CAATTGTCAAAGGTGAAATTCTTGGA 185 || ||| || |||||| | ||||| | | | | | |||||||||||||| Sbjct 128489 AAGTGGGACAGCCGGGGGCATTCGTATTGTGCCACT---AGACGTGAAATTCTTGGA 128436 >seq12081 Length=166231 Score = 100 bits (110), Expect = 3e-19 Identities = 83/99 (84%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC-TTTGCTCGAATACATTACCATGG 71 ||||||||||||||||||||| |||||||||||||| ||||| |||||| | | || Sbjct 57107 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCAGTTGCTGGAATACTCCAGCTAGG 57048 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 ||||| ||||||||| | | |||||||||||| ||||| Sbjct 57047 GATAATGGAATAGGAC-TCCAGTTCTATTTTGTTGGTTT 57010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511856740320