Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latimeria_20chalumnae_20[refseq_20GCF_5F000225785.1_202011-09-12] 22,819 sequences; 2,860,591,921 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq2637 77.0 2e-12 seq4126 73.4 2e-11 >seq2637 Length=283777 Score = 77.0 bits (84), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| || |||||||| ||||||||||||||||||| Sbjct 208818 CTCACTAAACCATC-CAATCGGTAGTA-GCAACGGGCGGTGTGTACAAAGGGCAGGGACT 208761 Query 109 TAATACAACGCAAGCT 124 |||| ||||| |||| Sbjct 208760 TAAT-TAACGCGAGCT 208746 >seq4126 Length=108736 Score = 73.4 bits (80), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| ||| ||||||| | ||||||| | ||||||||||||||||||| Sbjct 50600 CTCACTAAACCATCCAATT-GGTAGTA-GTGACGGGCAGTGTGTACAAAGGGCAGGGACT 50543 Query 109 TAATACAACGCAAGCT 124 |||| |||||| |||| Sbjct 50542 TAAT-CAACGCGAGCT 50528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300735650420