Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latimeria_20chalumnae_20[refseq_20GCF_5F000225785.1_202011-09-12] 22,819 sequences; 2,860,591,921 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1100 452 1e-124 seq4126 450 4e-124 seq2637 441 2e-121 seq50 289 9e-76 seq5422 286 1e-74 seq2550 158 4e-36 seq90 152 2e-34 seq3274 149 2e-33 seq25 109 2e-21 seq9947 104 7e-20 seq832 102 2e-19 seq1816 100 9e-19 seq1161 98.7 3e-18 seq100 98.7 3e-18 seq545 96.9 1e-17 seq5038 91.5 4e-16 seq351 91.5 4e-16 seq339 89.7 2e-15 seq1462 87.8 5e-15 seq1252 84.2 7e-14 seq468 78.8 3e-12 seq143 78.8 3e-12 seq423 75.2 3e-11 >seq1100 Length=765019 Score = 452 bits (500), Expect = 1e-124 Identities = 418/517 (81%), Gaps = 17/517 (3%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||| Sbjct 403736 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 403795 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| ||||||| |||| ||||||| |||||||||||||||||||||||||||||||| Sbjct 403796 TCCCCGCGTCGGGAGTGGGCAATTTGCACGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 403855 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||| Sbjct 403856 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGT 403915 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | ||||||||||||||||||||||||| ||| ||| ||| | ||||| | Sbjct 403916 AGGCACAGAAAGTACCATCGAAAGTTGATAGGGCAGACATTCGAAGGAATCGTCGCCACC 403975 Query 240 TCAAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACC-AAGGAGCC--CCGAAGGGC 294 ||| | |||||| | | ||| | || ||||| ||| |||| || | Sbjct 403976 ATGAGGACGTGCGATCGGCCCGAGGTTGTCTAGAGTCACCAAAGCAGCCAGGCGGACCCA 404035 Query 295 GTTGGTTTTTTATCTAATAAATACACCCCT-TCCGAA-GTC-GGGGTTTTTAGCATGTAT 351 | | | |||| ||| |||||| ||| | | ||||| ||| | | | || |||||||| Sbjct 404036 GATTGGTTTTGGTCTGATAAATGCACGCATCCCCGAAGGTCAGCGCTCGTTGGCATGTAT 404095 Query 352 TAGCTCTAGAATTACCACGGTTATCCATGTAGTAA----GGTACTATCAAATAAACGATA 407 |||||||||||||||||| |||||| || ||||| || | |||||| ||| ||| Sbjct 404096 TAGCTCTAGAATTACCACAGTTATC--TG-AGTAACATTGGAGCGATCAAAGGAACCATA 404152 Query 408 ACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCAT 467 |||||||||||||||||||||||||||||||||| | | || ||||||||||||||| Sbjct 404153 ACTGATTTAATGAGCCATTCGCAGTTTCACTGTACGCACCGTTTGTACTTAGACATGCAT 404212 Query 468 GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||| |||||||||| Sbjct 404213 GGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 404248 >seq4126 Length=108736 Score = 450 bits (498), Expect = 4e-124 Identities = 412/513 (80%), Gaps = 28/513 (5%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||| Sbjct 41590 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 41531 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 41530 TCCCCGCGTCGGGAGTGGGTAATTTGCGTGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 41471 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||| Sbjct 41470 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGT 41411 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | ||||||||||||||||||||||||| ||| ||| ||| | |||| Sbjct 41410 AGGCACAGAAAGTACCATCGAAAGTTGATAGGGCAGACATTCGAAGGAATCGTCGC---- 41355 Query 240 TCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGC---GT 296 ||||| | | ||||| || ||||||| | | || | || | | Sbjct 41354 ----GGCCACG---------AGGTTATCTAGAGTCACCAAAGCGGCCGGGCGGACCCGGA 41308 Query 297 TGGTTTTTTATCTAATAAATACACCCCT-TCCGAA-GTC-GGGGTTTTTAGCATGTATTA 353 | | |||| ||| |||||| ||| | | ||||| ||| | | | | |||||||||| Sbjct 41307 TTGGTTTTGGTCTGATAAATGCACGCATCCCCGAAGGTCAGCGCTCGTCGGCATGTATTA 41248 Query 354 GCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATAAACGATAACTG 411 |||||||||||||||| ||||||| ||| || || | |||||| ||| ||||||| Sbjct 41247 GCTCTAGAATTACCACAGTTATCCGAGTAACGT-TGGAGCGATCAAAGGAACCATAACTG 41189 Query 412 ATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCT 471 ||||||||||||||||||||||||||||||| | | || ||||||||||||||||||| Sbjct 41188 ATTTAATGAGCCATTCGCAGTTTCACTGTATGCACCGTTTGTACTTAGACATGCATGGCT 41129 Query 472 TAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||| |||||||||| Sbjct 41128 TAATCTTTGAGACAAGCATATG-CTACTGGCAG 41097 Score = 147 bits (162), Expect = 7e-33 Identities = 109/126 (87%), Gaps = 1/126 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || | |||| | ||||||| ||||| | ||||||||| Sbjct 76335 GTACTCATTCCAATTACAGGGCCTCGAAAGTGTCCTGTATTGTTATTTTTCGTCACTACC 76276 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||| | |||||| |||||||||||| |||||||||||||||||||||||||||||| | Sbjct 76275 TCCCAGCATCGGGAGTGGGTAATTTGCACGCCTGCTGCCTTCCTTGGATGTGGTAGCCAT 76216 Query 120 TTCTCA 125 |||||| Sbjct 76215 TTCTCA 76210 >seq2637 Length=283777 Score = 441 bits (488), Expect = 2e-121 Identities = 412/515 (80%), Gaps = 13/515 (3%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || | |||||| ||||||| ||||| ||||||||| | Sbjct 203659 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTTGTCACTATC 203600 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| | Sbjct 203599 TCCCCGCGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCAT 203540 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| ||||||| |||||||| | |||||||| Sbjct 203539 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCATTACCCGTGGTCACCATGGT 203480 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | ||||||||||||||||||||||||| ||| ||| ||| | |||| | | Sbjct 203479 AGGCACAGAAAGTACCATCGAAAGTTGATAGGGCAGACATTCGAAGGAATCGTCGCTGCC 203420 Query 240 TCAAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGC--- 294 | ||| || ||| | | ||||| || |||| || | | || | || | Sbjct 203419 ACGAGGATGTGTGATCGGCCCGAGGTTATCTAGAGTCACTAAAGCGGCCGGGTGGACCCG 203360 Query 295 GTTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTC-GGGGTTTTTAGCATGTAT 351 | | | |||| ||| |||||| ||| | | || | ||| | | | | |||||||| Sbjct 203359 GATTGGTTTTGGTCTGATAAATGCACGCATCCCCGCAGGTCAGCGCTCGTCGGCATGTAT 203300 Query 352 TAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATAAACGATAAC 409 |||||||||||||||||| ||||||| ||| || || | |||||| ||| ||||| Sbjct 203299 TAGCTCTAGAATTACCACAGTTATCCGAGTAACGT-TGGAGCGATCAAAGGAACCATAAC 203241 Query 410 TGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGG 469 ||||||||||||||||| |||||||||||||| | | || ||||||||||||||||| Sbjct 203240 TGATTTAATGAGCCATTTGCAGTTTCACTGTACGCACCGTTTGTACTTAGACATGCATGG 203181 Query 470 CTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| |||||||||| Sbjct 203180 CTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 203147 >seq50 Length=3219752 Score = 289 bits (320), Expect = 9e-76 Identities = 300/386 (78%), Gaps = 9/386 (2%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCA-AAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||| |||||||||||||| | || |||||| ||||||| ||||| | ||||||||| Sbjct 2961067 GTATTCATTCCAATTACAGGGCCTTGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 2961008 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||| | Sbjct 2961007 TCCCCGTGTCGGGAGTGGGTAATTTGCGTGCCTGCTGCCTTCCTGGGATGTGGTAGCCAT 2960948 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||||||||||| |||||||||| ||| ||| |||||| |||||| || | |||||||| Sbjct 2960947 TTCTCAGGCTCCTTCTCCGGAATTGAATCCTGATTCCCTGTTACCTGTGGTCACCATGGT 2960888 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 ||| | |||||| |||||||||||||||||| ||| ||| ||| | |||||| | Sbjct 2960887 AGGTACAGAAGGTACCATAGAAAGTTGATAGGGCAGACATTCGAAGGAATCGTCGCCGCC 2960828 Query 240 TCAAGGCCATGCGATT--CGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGC--- 294 ||||| ||| |||| | | ||||| || ||||||| | | || | | | Sbjct 2960827 ACAAGGATATGTGATTGGCCCAAGGTTATCTAGAGTCACCAAAGCGGCCGGGCAGACCCG 2960768 Query 295 GTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAA-GTC-GGGGTTTTTAGCATGTAT 351 | | | |||| ||| |||||| || | | || ||| ||| | | | || || ||||| Sbjct 2960767 GATTGGTTTTGGTCTGATAAATGCATGCATCCCAGAAGGTCAGTGCTCGTTGGCGTGTAT 2960708 Query 352 TAGCTCTAGAATTACCACGGTTATCC 377 |||||||||||||||||| ||||||| Sbjct 2960707 TAGCTCTAGAATTACCACAGTTATCC 2960682 >seq5422 Length=46612 Score = 286 bits (316), Expect = 1e-74 Identities = 217/255 (85%), Gaps = 1/255 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||| Sbjct 2102 GTACTCATTCCAATTACGGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 2043 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||| | Sbjct 2042 TCCCCGCGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGACGTGGTAGCCAT 1983 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||| ||||||||||||| |||||||||||||| | | |||||||| Sbjct 1982 TTCTCAGGCTCCCTCTCTGGAATCGAACCCTGATTCCCCGTTACCCATGGTCACCATGGT 1923 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | ||||||||||||||||||||||||| ||| ||| ||| | |||||| | Sbjct 1922 AGGCACAGAAAGTACCATCGAAAGTTGATAGGGCAGACATTCGAAGGAATCGTCGCCGCC 1863 Query 240 TCAAGGCCATGCGAT 254 | ||| | |||||| Sbjct 1862 ACGAGGACGTGCGAT 1848 >seq2550 Length=300023 Score = 158 bits (174), Expect = 4e-36 Identities = 152/195 (78%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 33 CCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCT 92 ||||||| |||||| | ||||||||||||||| ||| ||| |||||||||||| ||||| Sbjct 36028 CCTGTATTGGTATTTTTCGTCACTACCTCCCCGCGTCAGGAATGGGTAATTTGCACGCCT 36087 Query 93 GCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAA 152 ||||| ||||| |||||||||||| ||||||| |||| |||| ||| | ||||||| | Sbjct 36088 GCTGCTTTCCTCAGATGTGGTAGCCATTTCTCACACTCCTTCTCTGGAGTTGAACCCTGA 36147 Query 153 TTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGG 212 ||||| ||||||| | | ||||| | || | ||||| | | |||| ||||| Sbjct 36148 TTCCCTGTTACCCACAGTTGCCATGACAAGCACAGAAAGTACCAGCAAGGGTTGCTAGGG 36207 Query 213 CAGAAATTTGAATGA 227 ||| ||| |||||| Sbjct 36208 GAGACATTCGAATGA 36222 >seq90 Length=2605502 Score = 152 bits (168), Expect = 2e-34 Identities = 164/210 (78%), Gaps = 8/210 (4%) Strand=Plus/Plus Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCCGAA--GTCGGGGTTTTTAG-CATGTATT 352 |||||||| ||| |||||| ||| | | || || ||| | | | | | |||||||| Sbjct 1985292 TTGGTTTTGG-TCTGATAAATGCACGCATCCCCAAAGGTCAGCGCTCGTCGGCATGTATT 1985350 Query 353 AGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATAAACGATAACT 410 ||||||||||||||||| ||||||| ||| || || | |||||| ||| |||||| Sbjct 1985351 AGCTCTAGAATTACCACAGTTATCCGAGTAACGTT-GGAGCGATCAAAGGAACCATAACT 1985409 Query 411 GATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGC 470 ||||||||| |||||| ||||||| |||| | | | ||||||||||||||||| Sbjct 1985410 GATTTAATGGACCATTCACAGTTTCGCTGTCTGCACCATGTGCACTTAGACATGCATGGC 1985469 Query 471 TTAATCTTTGAGACAAGCATATGACTACTG 500 ||||||||||||||||||||||| |||||| Sbjct 1985470 TTAATCTTTGAGACAAGCATATG-CTACTG 1985498 >seq3274 Length=193312 Score = 149 bits (164), Expect = 2e-33 Identities = 128/155 (83%), Gaps = 9/155 (6%) Strand=Plus/Plus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGT---ACT-ATCAAAT 399 ||||||||| ||||||||||||| |||| ||| ||||| || | | |||||| Sbjct 71666 GCATGTATTCAATCTAGAATTACCA--GTTAGCCA---AGTAACGTTGGAGTGATCAAAG 71720 Query 400 AAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAG 459 | | |||||||||||||||||||||| ||||||||||||||| | | || ||||||| Sbjct 71721 GAGCCATAACTGATTTAATGAGCCATTTGCAGTTTCACTGTATGCACCGTTTCTACTTAG 71780 Query 460 ACATGCATGGCTTAATCTTTGAGACAAGCATATGA 494 ||||||||||||||||||||||||||||| ||||| Sbjct 71781 ACATGCATGGCTTAATCTTTGAGACAAGCGTATGA 71815 >seq25 Length=3980032 Score = 109 bits (120), Expect = 2e-21 Identities = 86/99 (87%), Gaps = 3/99 (3%) Strand=Plus/Plus Query 408 ACTGATTTAATGAGCCATTCGCA-GTTTCACTGTA-TAGATTGCTTATACTTAGACATGC 465 ||||||||||||||||| || || ||||||||||| | | || | ||||| || |||| Sbjct 2310132 ACTGATTTAATGAGCCAGTCACAAGTTTCACTGTACTGGCCTGTGTGTACTTGGAGATGC 2310191 Query 466 ATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||| |||||||||| Sbjct 2310192 ATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 2310229 >seq9947 Length=6930 Score = 104 bits (114), Expect = 7e-20 Identities = 86/103 (83%), Gaps = 3/103 (3%) Strand=Plus/Plus Query 402 ACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGAC 461 || |||||||||||||||||||||| | ||| |||||||| | | ||||||||| Sbjct 5015 ACCATAACTGATTTAATGAGCCATTTGTAGTATCACTGTACTGGCCACACGTACTTAGAC 5074 Query 462 ATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||| ||||||||| ||||| |||| Sbjct 5075 ATGCATGGCTTAATCTTTGAG--AAGCATATG-CTACTAGCAG 5114 >seq832 Length=922896 Score = 102 bits (112), Expect = 2e-19 Identities = 83/101 (82%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 393 ATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTA 452 ||||| ||| |||||||||||||||||||||| |||||||||||||| | | Sbjct 892700 ATCAATGGAACCATAACTGATTTAATGAGCCATTTGCAGTTTCACTGTAACGGCCATGTG 892759 Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATG 493 | || ||||||||||||||||||||||||| |||||| ||| Sbjct 892760 TGCTGAGACATGCATGGCTTAATCTTTGAGGCAAGCAAATG 892800 >seq1816 Length=478894 Score = 100 bits (110), Expect = 9e-19 Identities = 87/104 (84%), Gaps = 7/104 (7%) Strand=Plus/Minus Query 401 AACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTAT-AGATTGCTTAT--ACTT 457 ||| |||| |||| ||| ||||||||| |||||| ||||| || ||||| |||| Sbjct 6683 AACCATAATTGATATAACGAGCCATTCACAGTTTTGCTGTACCAGC---CTTATGTACTT 6627 Query 458 AGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGG 501 |||||||||| ||||||||||||||||||||||||| ||||||| Sbjct 6626 AGACATGCATAGCTTAATCTTTGAGACAAGCATATG-CTACTGG 6584 >seq1161 Length=727615 Score = 98.7 bits (108), Expect = 3e-18 Identities = 103/130 (79%), Gaps = 8/130 (6%) Strand=Plus/Minus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA-CTATCAAATAAA 402 |||||| ||||||||||| | |||| |||| | || ||||| | | | || ||| || Sbjct 433264 GCATGTCTTAGCTCTAGAGTAACCA--GTTACC--TG-AGTAACGGAGCGATTAAAGGAA 433210 Query 403 CGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACA 462 | |||| ||||||||||||||| || |||||||||||| | || || |||||||||| Sbjct 433209 CCATAATTGATTTAATGAGCCAATC--AGTTTCACTGTACCCACTGTTTGTACTTAGACA 433152 Query 463 TGCATGGCTT 472 |||||||||| Sbjct 433151 TGCATGGCTT 433142 >seq100 Length=2540970 Score = 98.7 bits (108), Expect = 3e-18 Identities = 170/249 (68%), Gaps = 26/249 (10%) Strand=Plus/Plus Query 2 TACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || || |||||| |||| | | |||||||| ||||||| | ||| | ||| ||||| Sbjct 2261857 TATTCCTTCCAACTACAGGGCTTCAAAAGAGTCCTGTATTGCTGTTTTTCATCATTACCT 2261916 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| ||| ||| ||||||||||| || ||||||||||||||||| ||||||| || Sbjct 2261917 CCCAAAGTCAGGAGTGGGTAATTTGTGCATCTGCTGCCTTCCTTGGACATGGTAGCAATT 2261976 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||| |||| | ||| || ||| ||| || ||| ||||| | Sbjct 2261977 TCTCAG----AATCTCTGAAATTGAGTCCTGATTTTCCATTA---------TCCATGCTT 2262023 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 || |||| |||||||||| |||| ||| |||||| |||| ||| | Sbjct 2262024 GG------------CATCAAAAGTTGATACAACAGACATTCAAATGAATCATCACCGTCA 2262071 Query 241 CAAGGCCAT 249 ||||| ||| Sbjct 2262072 CAAGGACAT 2262080 >seq545 Length=1205722 Score = 96.9 bits (106), Expect = 1e-17 Identities = 73/86 (85%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 406 TAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGC 465 |||| |||||||||| ||||| |||||||||||||| || | ||||||||||||| Sbjct 476407 TAACCGATTTAATGAACCATTTGCAGTTTCACTGTAGCAGCTGTGTGTACTTAGACATGC 476348 Query 466 ATGGCTTAATCTTTGAGACAAGCATA 491 ||| ||||||| |||||||||||||| Sbjct 476347 ATGACTTAATCATTGAGACAAGCATA 476322 >seq5038 Length=54312 Score = 91.5 bits (100), Expect = 4e-16 Identities = 87/110 (79%), Gaps = 1/110 (1%) Strand=Plus/Minus Query 390 ACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGC 449 || |||||| ||| ||||||| |||||||||||||| |||||||||||| | | Sbjct 11652 ACGATCAAAGGAACCATAACTGGTTTAATGAGCCATTTGCAGTTTCACTGGACCAGTCAT 11593 Query 450 TTATACTTAGACATGCAT-GGCTTAATCTTTGAGACAAGCATATGACTAC 498 | ||||||| ||||||| |||||||||||||||||||| | ||||| Sbjct 11592 ATCTACTTAGGCATGCATCACCTTAATCTTTGAGACAAGCAGACAACTAC 11543 >seq351 Length=1540241 Score = 91.5 bits (100), Expect = 4e-16 Identities = 161/233 (69%), Gaps = 5/233 (2%) Strand=Plus/Plus Query 89 GCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACC 148 || ||| ||||| |||||||| |||| | ||||||||||||| ||| | |||| ||||| Sbjct 735890 GCATGCCGCCTTTCTTGGATGCAGTAGTCATTTCTCAGGCTCCTTCTTCAGAATTGAACC 735949 Query 149 CTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGAT 208 | | | |||| ||||| | | ||||| ||| || | | |||| ||| |||| Sbjct 735950 CCAGTCCCCCATTACCTGCGGTCACCATAGTAAGCACAAAGAGTGTCATCAAAACTTGAC 736009 Query 209 AGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGAT--TCGTTAAGTTAT 266 |||||||| || ||| ||| |||| | | | ||||| || ||| || ||||| | Sbjct 736010 AGGGCAGACATGCGAAGGAATCATCACTGTCACAAGGATGTGTGATCGGTGTGAAGTTGT 736069 Query 267 TATGAATCACCAAGGAGCCCCGAAGGGC---GTTGGTTTTTTATCTAATAAAT 316 || ||||||| | | || | || | | | | |||| |||| |||||| Sbjct 736070 CCAGAGTCACCAAAGCGGCCAGGTGGACCTGGATTGGTTTTGATCTGATAAAT 736122 Score = 82.4 bits (90), Expect = 2e-13 Identities = 75/94 (80%), Gaps = 2/94 (2%) Strand=Plus/Plus Query 349 TATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATAAACGAT 406 ||||||||||||||||||||| |||||||| ||| || | | |||| | ||| Sbjct 736435 TATTAGCTCTAGAATTACCACAGTTATCCAAGTAACGTTGGAGCCAATCAGAGGAACCGC 736494 Query 407 AACTGATTTAATGAGCCATTCGCAGTTTCACTGT 440 || ||||||||||||||||| |||||||||||| Sbjct 736495 AATTGATTTAATGAGCCATTTCCAGTTTCACTGT 736528 >seq339 Length=1574348 Score = 89.7 bits (98), Expect = 2e-15 Identities = 88/110 (80%), Gaps = 4/110 (4%) Strand=Plus/Minus Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATA 454 ||| |||| || ||||||||||||| | | | ||||||||||| || | | | | Sbjct 709816 CAATTAAAGGA--ACTGATTTAATGATCTACTTGCAGTTTCACTTTACCAGTCCCGTG-A 709760 Query 455 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||| |||| |||||||||||||||| |||||| |||||||||| Sbjct 709759 CTTAGACATGTATGGTTTAATCTTTGAGACAAACATATG-CTACTGGCAG 709711 Score = 75.2 bits (82), Expect = 3e-11 Identities = 73/93 (78%), Gaps = 1/93 (1%) Strand=Plus/Plus Query 400 AAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAG 459 |||| |||||| || ||||||| ||| |||||| |||||| | | | ||||| | Sbjct 709600 AAACCATAACTTATCTAATGAGTCATCTACAGTTTTACTGTACTGGCTATGTGTACTTGG 709659 Query 460 ACATGCATGGCTTAATCTTTGAGACAAGCATAT 492 ||||||||| |||||||||||| ||||||||| Sbjct 709660 ACATGCATGA-TTAATCTTTGAGTCAAGCATAT 709691 >seq1462 Length=607739 Score = 87.8 bits (96), Expect = 5e-15 Identities = 148/206 (72%), Gaps = 19/206 (9%) Strand=Plus/Minus Query 302 TTTTATCTAATAAATACACCCCTTCC-GAAG-TCGGGGTTTTT-AGCATGTATTAGCTCT 358 ||| |||||| |||| ||| | | || |||| || | | | ||| |||||||||||| Sbjct 581452 TTTGATCTAACAAATGCACACATCCCTGAAGGTCAGCACCTGTCAGCTTGTATTAGCTCT 581393 Query 359 AGAATTAC-----CACGGTTATCCATGTAGTAA----GGTACTATCAAATAAACGATAAC 409 ||| |||| ||| | ||||| |||||| || | |||| | ||| ||||| Sbjct 581392 AGAGTTACTGTACCACAGCTATCC---TAGTAACATTGGAGCAATCAGAGGAACCATAAC 581336 Query 410 TGATTTAATGAGCCATTCGCAGTTTCACTGTAT-AGAT-TGCTTATACTTAGACATGCAT 467 ||||||| ||||| || ||||||| | |||| || ||| || ||| |||||||| Sbjct 581335 TGATTTAGCGAGCCGTTTGCAGTTTTAATGTACCAGCCATGCGTA--CTTCAACATGCAT 581278 Query 468 GGCTTAATCTTTGAGACAAGCATATG 493 ||| |||||| ||||| ||||| ||| Sbjct 581277 GGCCTAATCTCTGAGATAAGCAAATG 581252 >seq1252 Length=677213 Score = 84.2 bits (92), Expect = 7e-14 Identities = 89/112 (79%), Gaps = 4/112 (4%) Strand=Plus/Minus Query 393 ATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA-TAGATTGCTT 451 |||||| || |||| ||| ||||||||||||| |||||| ||| || ||| | | | Sbjct 2075 ATCAAAAGAAAAATAAGTGAGTTAATGAGCCATTTTCAGTTTTACTATACTAGCT-GTAT 2017 Query 452 ATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 503 || ||||| ||||||||||||||||||| || ||||| ||| |||||| || Sbjct 2016 GTATTTAGATATGCATGGCTTAATCTTTGGGA-AAGCAGATG-CTACTGCCA 1967 >seq468 Length=1312391 Score = 78.8 bits (86), Expect = 3e-12 Identities = 77/98 (79%), Gaps = 1/98 (1%) Strand=Plus/Minus Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATG 464 ||||| ||||||||||||| | |||||||||||||| | | |||||| ||| Sbjct 241104 ATAACCGATTTAATGAGCCGATTGCAGTTTCACTGTACCAGCCACGTGTACTTATACAAC 241045 Query 465 CATGGCTTAATCTTTGAGACAAGCATATGACTACTGGC 502 || ||||||||| ||||||||||||||| ||||| || Sbjct 241044 CACAGCTTAATCTCTGAGACAAGCATATG-CTACTAGC 241008 >seq143 Length=2314355 Score = 78.8 bits (86), Expect = 3e-12 Identities = 48/50 (96%), Gaps = 1/50 (2%) Strand=Plus/Plus Query 455 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct 835770 CTTAGATATGCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 835818 >seq423 Length=1407623 Score = 75.2 bits (82), Expect = 3e-11 Identities = 80/102 (78%), Gaps = 9/102 (9%) Strand=Plus/Plus Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGT---ATAGAT-TGCTTATACTTAGA 460 ||||||| ||||||||||||| ||||||||||||| | || ||| |||||| Sbjct 279824 ATAACTGGATTAATGAGCCATTGGCAGTTTCACTGTGCCAGCCATGTGC----ACTTAGG 279879 Query 461 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGC 502 |||||||| ||| |||||||| ||||| || || || ||||| Sbjct 279880 CATGCATGACTTGATCTTTGAAACAAGTATCTG-CTGCTGGC 279920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510055341824