Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lethenteron_20camtschaticum_20[genbank_20GCA_5F000466285.1_202013- 09-13] 86,125 sequences; 1,030,662,718 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq23585 77.0 2e-12 seq387 77.0 2e-12 seq462 71.6 8e-11 >seq23585 Length=2155 Score = 77.0 bits (84), Expect = 2e-12 Identities = 87/117 (74%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||| |||| | ||| |||| || |||| ||||| |||| Sbjct 485 GAACCCAAACACTTTGGTTTCCCACAAGCTGCCAGGCAGGTCATGGGAATAACGCCGCCT 426 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | ||| ||||| ||||| ||| |||| | ||||||||||||| |||||| Sbjct 425 GATCGCCAGTTGGCATCGTTTATGGTCGGAACTATGGCGGTATCTGATCGCCTTCGA 369 >seq387 Length=463322 Score = 77.0 bits (84), Expect = 2e-12 Identities = 87/117 (74%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||| |||| || ||| |||| || |||| |||| |||| Sbjct 421180 GAACCCAAAAACTTTGGTTTCCCGCAAGCTGCCAGGCAGGTCATGGGAATAATGCCGCCT 421239 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | ||| ||||| ||||| ||| |||| | ||||||||||||| |||||| Sbjct 421240 GATCGCCAGTTGGCATCGTTTATGGTCGGAACTAGGGCGGTATCTGATCGCCTTCGA 421296 >seq462 Length=363519 Score = 71.6 bits (78), Expect = 8e-11 Identities = 86/117 (74%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||| |||| || ||| |||| || |||| ||||| | || Sbjct 329591 GAACCCAAAAACTTTGGTTTCCCGCAAGCTGCCAGGCAGGTCATGGAAATAACGCCACCT 329532 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | ||| ||||| ||||| ||| || | | ||||||||||||| |||||| Sbjct 329531 GATCGCCAGTTGGCATCGTTTATGGTCTGAACAAGGGCGGTATCTGATCGCCTTCGA 329475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278175213750