Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lethenteron_20camtschaticum_20[genbank_20GCA_5F000466285.1_202013- 09-13] 86,125 sequences; 1,030,662,718 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq5019 136 2e-30 seq4460 136 2e-30 seq23585 132 2e-29 seq462 132 2e-29 seq412 132 2e-29 seq10910 114 6e-24 seq994 109 3e-22 seq85376 87.8 8e-16 >seq5019 Length=5553 Score = 136 bits (150), Expect = 2e-30 Identities = 94/104 (90%), Gaps = 3/104 (3%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct 3462 GGACAAGAAACTAACCAGGATTCCCCCAGTAACGGCGAGTGAACAGGGAAGAGCCCATCG 3521 Query 61 CCGAATCCCCGCC--CCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||| | | ||||| |||||||||| ||||||||| Sbjct 3522 CCGAATCCCCGGCTGCTGCGGT-GGGCGCGGGAGTTGTGGCGTA 3564 >seq4460 Length=6249 Score = 136 bits (150), Expect = 2e-30 Identities = 94/104 (90%), Gaps = 3/104 (3%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| || Sbjct 555 GGAAAAGAAACTAGCCAGGATTCCCCCAGTAACGGCGAGTGAACAGGGAAGAGCCCATCG 614 Query 61 CCGAATCCCCGCC--CCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||| | | ||||| |||||||||| ||||||||| Sbjct 615 CCGAATCCCCGGCTGCTGCGGT-GGGCGCGGGAGTTGTGGCGTA 657 >seq23585 Length=2155 Score = 132 bits (146), Expect = 2e-29 Identities = 93/104 (89%), Gaps = 3/104 (3%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct 2026 GGAAAAGAAACTAACCAGGATTCCCCCAGTAACGGCGAGTGAACAGGGAAGAGCCCATTG 2085 Query 61 CCGAATCCCCGCC--CCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||| | | ||||| ||| |||||| ||||||||| Sbjct 2086 CCGAATCCCCGGCTGCTGCGGT-GGGTGCGGGAGTTGTGGCGTA 2128 >seq462 Length=363519 Score = 132 bits (146), Expect = 2e-29 Identities = 92/102 (90%), Gaps = 3/102 (3%) Strand=Plus/Plus Query 3 AAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCC 62 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| Sbjct 331134 AAAAGAAACTAACCAGGATTCCCCCAGTAACGGCGAGTGAACAGGGAAGAGCCCATTGCC 331193 Query 63 GAATCCCCGCC--CCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||| | | ||||| |||||||||| ||||||||| Sbjct 331194 GAATCCCCGGCTGCTGCGGT-GGGCGCGGGAGTTGTGGCGTA 331234 >seq412 Length=414821 Score = 132 bits (146), Expect = 2e-29 Identities = 94/104 (90%), Gaps = 3/104 (3%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct 312926 GGAAAAGAAACTAACCAGGATTCCCCCAGTAACGGCGAGTGAACAGGGAAGAGCCCATCG 312985 Query 61 CCGAATCCCC-GC-CCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||||||||| || | ||||| |||||||||| |||||| || Sbjct 312986 CCGAATCCCCAGCTGCTGCGGT-GGGCGCGGGAGTTGTGGCTTA 313028 >seq10910 Length=3381 Score = 114 bits (126), Expect = 6e-24 Identities = 89/104 (86%), Gaps = 3/104 (3%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||| |||||| |||||||||||||||||||||||||| |||| || Sbjct 310 GGAAAAGAAACTAACCAGAATTCCCCCAGTAACGGCGAGTGAACAGGGAAGAACCCAACG 369 Query 61 CCGAATCCCCGCC--CCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||||||| || | | ||||| |||| |||| ||||| ||| Sbjct 370 CCGAATCCACGGCTGCTGCGGT-GGGCCTGGGAGTTGTGGAGTA 412 >seq994 Length=111753 Score = 109 bits (120), Expect = 3e-22 Identities = 88/104 (85%), Gaps = 3/104 (3%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| || Sbjct 462 GGAAAAGAAACTAACCAGAATTCCCCCAGTAACGGCGAGTGAACAGGGAAGAGCCCATCG 521 Query 61 CCGAATCCCCGCC--CCGCGGTGGGGCGCGGGACATGTGGCGTA 102 || ||||| || | | || || |||| |||| ||||| ||| Sbjct 522 CCAAATCCACGGCTGCTGCAGT-GGGCCTGGGAGTTGTGGAGTA 564 >seq85376 Length=1006 Score = 87.8 bits (96), Expect = 8e-16 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||| |||||||||||||||||| || || |||||||| ||||||||| || || || Sbjct 571 GGAAAATAAACTAACCAGGATTCCCCCAATATCGGCGAGTAAACAGGGAAAAGTGCACCG 630 Query 61 CCGAATCCCCG 71 ||||||||||| Sbjct 631 CCGAATCCCCG 641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230213970000