Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lethenteron_20camtschaticum_20[genbank_20GCA_5F000466285.1_202013- 09-13] 86,125 sequences; 1,030,662,718 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq67536 248 1e-63 seq23585 248 1e-63 seq387 248 1e-63 seq72298 244 2e-62 seq462 244 2e-62 seq83827 241 2e-61 seq412 235 9e-60 seq5019 230 4e-58 seq58254 125 1e-26 seq707 107 3e-21 seq1655 100 5e-19 seq434 100 5e-19 seq7661 96.9 6e-18 >seq67536 Length=1177 Score = 248 bits (274), Expect = 1e-63 Identities = 206/247 (83%), Gaps = 6/247 (2%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| || Sbjct 421 TCAGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-TC 363 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACC--ATAGT 133 || || | |||||| |||||| | ||||||||||||||| | || ||| | || Sbjct 362 AATCT-CGTGTGGCTGAAAGCCACTCGTCCCTCTAAGAAGCTCAACGCCGACCGCACAGG 304 Query 134 CGATGGG--GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAAT 191 | | |||| |||||| || |||||||||||||||||||| |||||||||||| Sbjct 303 GGCCGCTTTGCTAGTTAGCACGTCGGAGTCTCGTTCGTTATCGGAATGAACCAGACAAAT 244 Query 192 CACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCA 251 | |||||||||||| ||||||||||||||||||||||| ||||| |||||||||| ||| Sbjct 243 CGCTCCACCAACTACGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCTCTCA 184 Query 252 ATCTGTC 258 ||||||| Sbjct 183 ATCTGTC 177 >seq23585 Length=2155 Score = 248 bits (274), Expect = 1e-63 Identities = 206/247 (83%), Gaps = 6/247 (2%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| || Sbjct 857 TCAGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-TC 799 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACC--ATAGT 133 || || | |||||| |||||| | ||||||||||||||| | || ||| | || Sbjct 798 AATCT-CGTGTGGCTGAAAGCCACTCGTCCCTCTAAGAAGCTCAACGCCGACCGCACAGG 740 Query 134 CGATGGG--GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAAT 191 | | | |||| |||||| || |||||||||||||||||||| |||||||||||| Sbjct 739 GGCCGCGTAGCTAGTTAGCACGTCGGAGTCTCGTTCGTTATCGGAATGAACCAGACAAAT 680 Query 192 CACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCA 251 | |||||||||||| ||||||||||||||||||| ||| ||||| |||||||||| ||| Sbjct 679 CGCTCCACCAACTACGAACGGCCATGCACCACCAGCCACGGAATCGAGAAAGAGCTCTCA 620 Query 252 ATCTGTC 258 ||||||| Sbjct 619 ATCTGTC 613 >seq387 Length=463322 Score = 248 bits (274), Expect = 1e-63 Identities = 206/247 (83%), Gaps = 6/247 (2%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| || Sbjct 420808 TCAGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-TC 420866 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAAC--CATAGT 133 || || | |||||| |||||| | ||||||||||||||| | || || || || Sbjct 420867 AATCT-CGTGTGGCTGAAAGCCACTCGTCCCTCTAAGAAGCTCAACGCCGACTGCACAGG 420925 Query 134 CGATGGG--GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAAT 191 | || |||| |||||| || |||||||||||||||||||| |||||||||||| Sbjct 420926 GGCTGCATAGCTAGTTAGCACGTCGGAGTCTCGTTCGTTATCGGAATGAACCAGACAAAT 420985 Query 192 CACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCA 251 | |||||||||||| ||||||||||||||||||||||| |||| |||||||||| ||| Sbjct 420986 CGCTCCACCAACTACGAACGGCCATGCACCACCACCCACGGAATTGAGAAAGAGCTCTCA 421045 Query 252 ATCTGTC 258 ||||||| Sbjct 421046 ATCTGTC 421052 >seq72298 Length=1125 Score = 244 bits (270), Expect = 2e-62 Identities = 205/247 (83%), Gaps = 6/247 (2%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct 906 TCAGTGTAGCGCGCGTGCGGCCCCAGACATCTAAGGGCATCACAGACCTGTTATTGC-TC 848 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACC--ATAGT 133 || || | |||||| |||||| | ||||||||||||||| | || ||| | || Sbjct 847 AATCT-CGTGTGGCTGAAAGCCACTCGTCCCTCTAAGAAGCTCAACGCCGACCGCACAGG 789 Query 134 CGATGGG--GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAAT 191 | | |||| |||||| || | ||||||||||||||| |||| |||||||||||| Sbjct 788 GGCAGCATAGCTAGTTAGCACGTCAGAGTCTCGTTCGTTATCAGAATGAACCAGACAAAT 729 Query 192 CACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCA 251 | |||||||||||| ||||||||||||||||||||||| ||||| |||||||||| ||| Sbjct 728 CGCTCCACCAACTACGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCTCTCA 669 Query 252 ATCTGTC 258 ||||||| Sbjct 668 ATCTGTC 662 >seq462 Length=363519 Score = 244 bits (270), Expect = 2e-62 Identities = 208/248 (84%), Gaps = 10/248 (4%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | || Sbjct 329961 TCAGTGTAGCGCGCGTGCGGCCCCGAACATCTAAGGGCATCACAGACCTGTTATTAC-TC 329903 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC-CA--GCCACCAACCATAG 132 || || | |||||| |||||| | ||||||||||||||| || |||| | || | || Sbjct 329902 AATCT-CGTGTGGCTGAAAGCCACTTGTCCCTCTAAGAAGCTCAATGCCAACCAC-ACAG 329845 Query 133 TCGATGGG--GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA 190 | || | |||| |||||| || ||||||||||||||||||| ||||||||||| Sbjct 329844 GGGCTGCGTAGCTAGTTAGCACGTCGGACTCTCGTTCGTTATCGGAATGAACCAGACAAA 329785 Query 191 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATC 250 || |||||||||||| ||||||||||||||||| |||| ||||| |||||||||| || Sbjct 329784 TCGCTCCACCAACTACGAACGGCCATGCACCAC--CCCACGGAATCGAGAAAGAGCTCTC 329727 Query 251 AATCTGTC 258 |||||||| Sbjct 329726 AATCTGTC 329719 >seq83827 Length=1020 Score = 241 bits (266), Expect = 2e-61 Identities = 208/249 (84%), Gaps = 8/249 (3%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||| Sbjct 283 TCAGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 225 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC-CA--GCC-ACCAACCATA 131 || | || |||||| |||||| | ||||||||||||||| || ||| ||| || Sbjct 224 AATC-TCGTGTGGCTGAAAGCCACTCGTCCCTCTAAGAAGCTCAACGCCGACCGCACAGG 166 Query 132 GTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA- 190 | | | |||| |||||| || |||||||||||||||||||| ||||||||||| Sbjct 165 GGCCGCGTAGCTAGTTAGCACGTCGGAGTCTCGTTCGTTATCGGAATGAACCAGACAAAC 106 Query 191 TCACTCCACCAACTAAGAACGG-CCATGCACCACCACCCATAGAATCAAGAAAGAGCTAT 249 || |||||||||||| |||||| ||||||||||||||||| ||||| |||||||||| | Sbjct 105 TCGCTCCACCAACTACGAACGGCCCATGCACCACCACCCACGGAATCGAGAAAGAGCTCT 46 Query 250 CAATCTGTC 258 ||||||||| Sbjct 45 CAATCTGTC 37 >seq412 Length=414821 Score = 235 bits (260), Expect = 9e-60 Identities = 202/247 (82%), Gaps = 6/247 (2%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| ||||||||| |||| |||| | ||||||||||||||||||||||||||||||| || Sbjct 312258 TCAATGTAGCGCGGGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-TC 312200 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATA---- 131 || || | |||||| |||||| | ||||||||||||||| | || |||| | Sbjct 312199 AATCT-CGTGTGGCTGAAAGCCACTCGTCCCTCTAAGAAGCTCAACTCCGACCACACAGT 312141 Query 132 GTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAAT 191 | | | | |||| |||||| || |||| |||||||||| |||| |||||||||||| Sbjct 312140 GGCCACGTAGCTAGTTAGCACGTCGGAGTCTTGTTCGTTATCAGAATGAACCAGACAAAT 312081 Query 192 CACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCA 251 | |||||||||||| ||||||||||||||||||||||| ||||| |||||||||| ||| Sbjct 312080 CGCTCCACCAACTACGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCTCTCA 312021 Query 252 ATCTGTC 258 ||||||| Sbjct 312020 ATCTGTC 312014 >seq5019 Length=5553 Score = 230 bits (254), Expect = 4e-58 Identities = 202/247 (82%), Gaps = 6/247 (2%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| || Sbjct 2306 TCAGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-TC 2248 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACC--ATAGT 133 || || | |||||| |||||| | ||| ||||||||||| | || ||| | || Sbjct 2247 AATCT-CGTGTGGCTGAAAGCCACTCGTCTCTCTAAGAAGCTCAACGCCGACCGCACAGG 2189 Query 134 CGATGGG--GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAAT 191 | | | |||| |||||| || ||||||||||||||| ||| |||||||| ||| Sbjct 2188 GGCCGCGTAGCTAGTTAGCACGTCGGAGTCTCGTTCGTTATCAAAATGAACCAGACGAAT 2129 Query 192 CACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCA 251 | |||||||||||| ||||||||||||||||||||||| ||||| |||||||||| ||| Sbjct 2128 CGCTCCACCAACTACGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCTCTCA 2069 Query 252 ATCTGTC 258 ||| ||| Sbjct 2068 ATCCGTC 2062 >seq58254 Length=1291 Score = 125 bits (138), Expect = 1e-26 Identities = 90/101 (89%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||| Sbjct 1186 TCAGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 1244 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC 116 || | || |||||| |||||| | ||||||||||||||| Sbjct 1245 AATC-TCGTGTGGCTGAAAGCCACTCGTCCCTCTAAGAAGC 1284 >seq707 Length=201991 Score = 107 bits (118), Expect = 3e-21 Identities = 74/84 (88%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 141 GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACC 200 |||| ||| || || | |||||||||||||||||||| ||||||||||||| ||||||| Sbjct 167773 GCTAGTTAACACGTCAGAGTCTCGTTCGTTATCGGAATGAACCAGACAAATCGCTCCACC 167714 Query 201 AACTAAGAACGGCCATGCACCACC 224 ||||| ||||||||||||||| || Sbjct 167713 AACTACGAACGGCCATGCACCTCC 167690 >seq1655 Length=46217 Score = 100 bits (110), Expect = 5e-19 Identities = 131/177 (74%), Gaps = 6/177 (3%) Strand=Plus/Minus Query 18 AGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAA 77 ||||||| ||| ||||| ||| | ||||||||| | |||||||||||||||||| ||||| Sbjct 44999 AGTGTAGTGCGTGTGCGACCCCGTACATCTAAGTGTATCACAGACCTGTTATTG-CTCAA 44941 Query 78 ACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC-AGC---CACCAACCATAGT 133 | || ||||||| ||||| | ||||||||||||||| | | |||| || | Sbjct 44940 TC-TCGTTTGGCTGAGAGCCACTCATCCCTCTAAGAAGCCTAACGCTGACCACACAGGGG 44882 Query 134 CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA 190 | | || | ||||| ||| |||||||| | ||||||| || |||||||| Sbjct 44881 CCACATAGCGAGATAGCACGTTGGAGTCTCGTTTAATTTCGGAATAAAACAGACAAA 44825 >seq434 Length=391052 Score = 100 bits (110), Expect = 5e-19 Identities = 134/182 (74%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 18 AGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAA 77 ||||||||||||||||| | | | ||||||||| | ||||||||||||||| || ||||| Sbjct 246461 AGTGTAGCGCGCGTGCGACGCCGTACATCTAAGTGTATCACAGACCTGTTACTG-CTCAA 246403 Query 78 ACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC-AGC---CACCAACCATAGT 133 | || ||||||| ||||| | ||||||||||||||| | | |||| || | Sbjct 246402 TC-TCGTTTGGCTGAGAGCCACTCATCCCTCTAAGAAGCCTAACGCTGACCACACAGGGG 246344 Query 134 CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193 | | || | ||||| || |||||||| | ||||||| || |||||||||| Sbjct 246343 CCACATAGCGAGATAGCATGTCGGAGTCTCGTTTAATTTCGGAATAAAACAGACAAATCG 246284 Query 194 CT 195 || Sbjct 246283 CT 246282 >seq7661 Length=4259 Score = 96.9 bits (106), Expect = 6e-18 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 183 CAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAA 242 |||||||||| |||| ||||||| ||||||||||||||||||||||| ||||| ||||| Sbjct 212 CAGACAAATCGCTCCCCCAACTACGAACGGCCATGCACCACCACCCACGGAATCGAGAAA 153 Query 243 GAGCTATCAATCTGTC 258 | ||| ||||||| || Sbjct 152 GCGCTCTCAATCTTTC 137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796135201125