Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lethenteron_20camtschaticum_20[genbank_20GCA_5F000466285.1_202013- 09-13] 86,125 sequences; 1,030,662,718 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq175 111 1e-19 >seq175 Length=1232269 Score = 111 bits (122), Expect = 1e-19 Identities = 97/121 (80%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 |||| || ||| ||||| ||||| | | ||||| || || ||||| |||||||| | Sbjct 438705 TGGAGCGCTTCAGCCAGGAAGTGCAGATCACAGAGGCACGATGCTTCTATGGCTTCCAAA 438764 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGG 61375 | || |||||||| ||||||||||||||||||| |||||||||| |||||||||| || Sbjct 438765 TCGCAATGGAGAACATCCACTCGGAGATGTACAGCCTTCTCATCGACACGTACATCAAGG 438824 Query 61376 A 61376 | Sbjct 438825 A 438825 Score = 86.0 bits (94), Expect = 5e-12 Identities = 82/104 (79%), Gaps = 1/104 (1%) Strand=Plus/Plus Query 61717 ATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGA 61776 || || ||||| |||||||||||||| |||||||| || ||||||||||| |||| Sbjct 441007 ATTGAGCAGGAGTTTCTGACTGACGCGCTGCCCGTCAACCTTATCGGCATGAACTGTGAC 441066 Query 61777 CTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTG-TTGG 61819 || ||| |||||| || || ||||| |||||| | ||| |||| Sbjct 441067 CTCATGAAGCAGTACATCGAGTTTGTGGCCGACAGGCTGCTTGG 441110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397150693370000