Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lethenteron_20camtschaticum_20[genbank_20GCA_5F000466285.1_202013- 09-13] 86,125 sequences; 1,030,662,718 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq17 122 4e-22 seq1427 91.5 6e-13 >seq17 Length=5228726 Score = 122 bits (134), Expect = 4e-22 Identities = 136/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 448987 CTCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTC 449046 ||||| || |||| || |||||||||||||||| | | |||||||| | | |||||| Sbjct 3053687 CTCGATCAGCATGCCGATGGTCATGCGCGACGGGAATCCGTGCGGGTTGAACAGGATGTC 3053746 Query 449047 GGGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGAC 449106 ||||||| |||| || || |||| ||||| ||||||| | || | ||| || Sbjct 3053747 GGGCGTCATGCCGCCCTCGCTGAACGGCATATCCTCGGTGCGCCACAGCCGGCTCAAGAT 3053806 Query 449107 GCCCTTCTGGCCGTGGCGGCTGCAGAACTTGTCCCCCTGCTCGGGCTTGCGTGTGAAGCG 449166 |||||||||||||||||||||| ||||||||| || | ||| ||||| | | ||| Sbjct 3053807 GCCCTTCTGGCCGTGGCGGCTGGCGAACTTGTCGCCGATCGTGGGGTTGCGGGGAATGCG 3053866 Query 449167 CA 449168 || Sbjct 3053867 CA 3053868 >seq1427 Length=60525 Score = 91.5 bits (100), Expect = 6e-13 Identities = 96/126 (76%), Gaps = 3/126 (2%) Strand=Plus/Minus Query 351147 GGTTGATGCCGATGGTGTAGCCCCGCGGGTTGCGCCTCACGCGGTGCACCATGATGGACC 351206 |||||| || || |||| | | || || ||||| || | |||| |||| |||||| Sbjct 38813 GGTTGAGGCGGAAGGTGGACCAGGGCAGGATGCGC---ACTCTGTGCCCCATCATGGACA 38757 Query 351207 CGTTGTGGAGCGTGGGCTGGCGATTGTGGATGATGATGTCGCCATCGCGCAAGTGCCTCT 351266 ||||| |||||||||||||| ||| ||||| |||||| || |||| || ||| |||| Sbjct 38756 TCTTGTGCAGCGTGGGCTGGCGGTTGAAGATGACGATGTCTCCGTCGCACATGTGTCTCT 38697 Query 351267 CCACCT 351272 |||||| Sbjct 38696 CCACCT 38691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2082382630352750