Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucoraja_20erinacea_20[genbank_20GCA_5F000238235.1_202011-12-15] 2,962,366 sequences; 1,555,461,038 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq636314 172 1e-40 >seq636314 Length=4851 Score = 172 bits (190), Expect = 1e-40 Identities = 206/276 (75%), Gaps = 4/276 (1%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98 |||| ||| ||| |||| | |||| || | ||||||||||||||||||||||||| Sbjct 2256 ATGCTCTTAGCTGAGTGTCCTGGGGGTCCGAAGCGTTTACTTTGAAAAAATTAGAGTGTT 2197 Query 99 CAAAGCAGGCCT--TTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTT 156 ||||||||||| | || |||||| ||| |||||||| ||||||||| ||||| Sbjct 2196 CAAAGCAGGCCGGGTCGCCTGAATACTCCAGCTAGGAATAATGGAATAGGACCA-CGGTT 2138 Query 157 CTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGT 216 ||||||||||||||| | || | | |||||||| ||||| | |||||| | || Sbjct 2137 CTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGAGGGACGGCCGGGGGCATTCGT 2078 Query 217 ATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTT 276 ||| | |||||||||||||||||| ||||| || | |||||||| || Sbjct 2077 ATTGTGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACAAAAGCGAAAGCATT 2018 Query 277 CACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 ||||| |||||||||||||||| |||||||||| Sbjct 2017 TGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 1983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 888088426368