Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Petromyzon_20marinus_20[genbank_20GCA_5F000148955.1_202010-10-07] 25,005 sequences; 885,534,757 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq3952 73.4 2e-11 seq14823 71.6 6e-11 seq16 71.6 6e-11 >seq3952 Length=27917 Score = 73.4 bits (80), Expect = 2e-11 Identities = 51/57 (89%), Gaps = 1/57 (2%) Strand=Plus/Plus Query 5 AAGAAACTAACCAGGATTCCCTCAGTAA-CGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||| |||||| ||| |||||||||||||||||||| || Sbjct 161 AAGAAACTAACCAGGATTCCTCCAGTAATGGGCAAGTGAACAGGGAAGAGCCCATCG 217 >seq14823 Length=6091 Score = 71.6 bits (78), Expect = 6e-11 Identities = 57/69 (83%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||| ||| || || |||||| ||| || ||||||||||||||||||| |||| | Sbjct 188 GGAAAATAAATGAATCATGATTCCACCAGCAATGGCGAGTGAACAGGGAAGAACCCATCA 129 Query 61 CCGAATCCC 69 ||||||||| Sbjct 128 CCGAATCCC 120 >seq16 Length=1685948 Score = 71.6 bits (78), Expect = 6e-11 Identities = 61/74 (82%), Gaps = 10/74 (14%) Strand=Plus/Minus Query 27 CAGTAACGGCGAGTGAACAGGGAA-------GAGCCCAGCGCCGAATCCCCGCC--CCGC 77 |||||||||||||||||||||||| ||||||| ||||||||||||| | | || Sbjct 957290 CAGTAACGGCGAGTGAACAGGGAACAGGGAAGAGCCCATCGCCGAATCCCCGGCTGCTGC 957231 Query 78 GGTGGGGCGCGGGA 91 ||| |||||||||| Sbjct 957230 GGT-GGGCGCGGGA 957218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230345989200