Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= AAMG01001688.1 Length=394 Score E Sequences producing significant alignments: (Bits) Value seq8131 129 1e-27 seq4245072 118 2e-24 >seq8131 Length=53026 Score = 129 bits (142), Expect = 1e-27 Identities = 179/246 (73%), Gaps = 6/246 (2%) Strand=Plus/Minus Query 1 CGATGGTCAGCAACTCGCCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGACCGACTT 60 |||||||||||| |||||||||||||| |||||||||||| || || || |||||| | Sbjct 52229 CGATGGTCAGCAGCTCGCCGCCCACCTCGGTCCACGCCAGACCGGTCACAACACCGACCT 52170 Query 61 GATCCT-GCTGCTCGGCCAGGCCGTAGCTGAATTTGCGCACGCCGAGGAAGTGCTCCAGG 119 | |||| |||| ||| | |||||||| | || |||| |||||||| | ||| | Sbjct 52169 GGTCCTCGCTG-TCGATCTCGCCGTAGCGATACTTCGGCACACCGAGGAACTCCTCGACA 52111 Query 120 GAGTCGGCCGTGACCTTCACCGAGAAGCGTTTTTCCAGCGCAT--GTTCCTTGACCGCCT 177 | | || || ||||||||| || || ||| || ||| ||||||| || ||| Sbjct 52110 ACGGCCGCGGTCACCTTCACC--GACTTCTTCTTCGAGATCATGAGTTCCTTCACACCCT 52053 Query 178 TGCGGCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGGCTTCGCGGGTGTAGT 237 ||||| | ||| |||| ||||| ||| |||||| || || |||||||||||| Sbjct 52052 TGCGGGCCAGTGTCGAAATCTCACGCTCGAGGTTACGCACGCCCGCCTCGCGGGTGTAGC 51993 Query 238 AGCGGA 243 ||||| Sbjct 51992 GGCGGA 51987 >seq4245072 Length=375 Score = 118 bits (130), Expect = 2e-24 Identities = 165/227 (73%), Gaps = 7/227 (3%) Strand=Plus/Minus Query 1 CGATGGTCAGCAACTCGCCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGACCGACTT 60 |||||||||||| |||||||| |||| |||||| |||||||| |||||| ||||| | Sbjct 225 CGATGGTCAGCAGATCGCCGCCGACCTCGGTCCATGCCAGGCCCACGACCTGGCCGACCT 166 Query 61 GATCCTGCTGCTCGGCCAGGCCGTAGCTGAATTTGCGCACGCCGAGGAAGTGCTCCAGGG 120 | | | |||||||| ||||||||||| | |||||||| || ||| ||| ||| Sbjct 165 GGTTGTTGTGCTCGGCACGGCCGTAGCTGTACTTGCGCACACCCAGGTAGTCGGTGAGGT 106 Query 121 AGTCGGCCGTGACCTTCACCGAGAAGC----GTTTTTCCAGC-GCATGTTCCTTGACCGC 175 |||||| |||| || | | || | || | ||| ||| || |||||||| | Sbjct 105 TGTCGGCATTGACGACGACGGTG-GGCTCCAGCTTCTTGAGCTGCA-GTCCCTTGACCAC 48 Query 176 CTTGCGGCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGG 222 ||||||||||||||| | || | ||| ||||| ||||| |||| Sbjct 47 CTTGCGGCAGATCTTGGAGAGTTCGCGTTCCAGCGAGCGCACGCCGG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1039621197120