Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq596560 152 3e-35 seq16097 129 4e-28 seq10253695 87.8 1e-15 seq10253694 87.8 1e-15 seq2815171 82.4 5e-14 seq5988862 78.8 6e-13 seq3797296 78.8 6e-13 seq2767969 75.2 7e-12 seq5113806 73.4 3e-11 >seq596560 Length=3618 Score = 152 bits (168), Expect = 3e-35 Identities = 118/138 (86%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct 1416 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTG 1475 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||||| |||||| | || | |||||| |||||| ||| ||||||||||||| Sbjct 1476 CTTTCGCACCTGCTCGCGCCGTCACGCTCGCAGTCAAGCTGGCTTATGCCATTGCACTAA 1535 Query 121 CACTAC-GATTTCCGACC 137 | || | ||| ||||||| Sbjct 1536 C-CTCCTGATGTCCGACC 1552 >seq16097 Length=42722 Score = 129 bits (142), Expect = 4e-28 Identities = 112/139 (81%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 ||||||||||||||||||||||||||| |||| | ||||||||||||||||||| Sbjct 42074 TACCTTTTATCCGTTGAGCGATGGCCCATCCACGCGGGACCACCGGATCACTATGACCGA 42133 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||| ||||||| | |||||| ||||||| ||| ||| ||| ||||||| ||| Sbjct 42134 CTTTCGTCTCTGCTCGACTTGTTGGTCTCGCAGTCAGGCAGGCTTATGCCATTATACTCG 42193 Query 121 CACTACGATTTCCGACCGT 139 ||||||||||||||| Sbjct 42194 ACGAACGATTTCCGACCGT 42212 >seq10253695 Length=124084 Score = 87.8 bits (96), Expect = 1e-15 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| |||||||||| || || |||||||||| | || Sbjct 92623 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 92564 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| |||||| | || | ||| ||| |||||| | ||| |||| ||||||| Sbjct 92563 CTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 92506 >seq10253694 Length=124084 Score = 87.8 bits (96), Expect = 1e-15 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| |||||||||| || || |||||||||| | || Sbjct 92623 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 92564 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| |||||| | || | ||| ||| |||||| | ||| |||| ||||||| Sbjct 92563 CTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 92506 >seq2815171 Length=574 Score = 82.4 bits (90), Expect = 5e-14 Identities = 89/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||||| |||||||| || ||| |||||||||| | || Sbjct 239 TAACTTTTATCCGTTGAGCGATGACCCTTCCACTCGGCACCATCGGATCACTAAGGCCAA 180 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| || ||| | || | ||| | | |||||| | ||| |||| ||||||| Sbjct 179 CTTTCGTCCCTTCTCGATGGGTGGGTCTTGTAGTCAAGCTCCCTTCTGCCTTTGCACT 122 >seq5988862 Length=286 Score = 78.8 bits (86), Expect = 6e-13 Identities = 88/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || ||||||||| |||||||||||||||||| || | || | |||||||| | | | Sbjct 64 TAACTTTTATCCATTGAGCGATGGCCCTTCCGCTCGGAACCGTCAGATCACTAAGGCTGG 123 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| |||||| || | ||| ||| |||||| | ||| |||| ||||||| Sbjct 124 CTTTCGTCCCTGCTCACCGGGTGGGTCTTGCATTCAAGCTCCCTTCTGCCTTTGCACT 181 >seq3797296 Length=416 Score = 78.8 bits (86), Expect = 6e-13 Identities = 88/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||| |||||||||||||| || ||| ||||||||| | || Sbjct 249 TAACTTTTATCCGTTGAACGATGGCCCTTCCACTCGGCACCATTGGATCACTAAGGCCGA 308 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 ||||| || ||| | |||| ||| ||| |||||| | || |||| ||||||| Sbjct 309 ATTTCGTCCCTACTCAACAGGTTGGTCTTGCAGTCAAGCTCCTTTCTGCCTTTGCACT 366 >seq2767969 Length=585 Score = 75.2 bits (82), Expect = 7e-12 Identities = 85/114 (75%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 5 TTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTGCTTT 64 |||||| | ||||| ||||||||||||| | | ||| |||||||||| | || |||| Sbjct 470 TTTTATTCATTGAGAGATGGCCCTTCCACTTGGAACCATCGGATCACTAAGGCCAACTTT 529 Query 65 CGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 | |||||| | || | ||| ||| |||||| | ||| |||| ||||||| Sbjct 530 CATCCCTGCTCGATGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 583 >seq5113806 Length=318 Score = 73.4 bits (80), Expect = 3e-11 Identities = 87/118 (74%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| | |||||||| ||| ||| || ||||||| | | Sbjct 39 TAACTTTTATCCGTTGAGCGACGACCCTTCCACTCAGCACCATCGAATCACTAAGGCTGA 98 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||| |||||| | || | ||| ||| |||||| | |||||||| || |||| Sbjct 99 ATTTCATCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTTTGCCTTTACACT 156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318162806500