Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq596560 237 1e-60 seq16097 120 3e-25 seq2767969 82.4 7e-14 seq2815171 78.8 8e-13 >seq596560 Length=3618 Score = 237 bits (262), Expect = 1e-60 Identities = 146/156 (94%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1428 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 1487 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 |||| |||||||| ||||||||||||| ||||||||||||||||||||||| |||||| Sbjct 1488 CTCGCGCCGTCACGCTCGCAGTCAAGCTGGCTTATGCCATTGCACTAACCTCCTGATGTC 1547 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 ||||| ||||||| |||||||||||||||||||| Sbjct 1548 CGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTA 1583 >seq16097 Length=42722 Score = 120 bits (132), Expect = 3e-25 Identities = 120/156 (77%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||| |||| | | |||||||||||||||||||| |||||| ||| Sbjct 42086 GTTGAGCGATGGCCCATCCACGCGGGACCACCGGATCACTATGACCGACTTTCGTCTCTG 42145 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| || ||||||||||| || |||||||||||| ||| | ||||| || Sbjct 42146 CTCGACTTGTTGGTCTCGCAGTCAGGCAGGCTTATGCCATTATACTCGACGAACGATTTC 42205 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 ||||||| | ||| ||| ||| | ||||||||| Sbjct 42206 CGACCGTTCTGAGCCTACCATCGCACGCCTCCGTTA 42241 >seq2767969 Length=585 Score = 82.4 bits (90), Expect = 7e-14 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 25 TTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGC 84 ||||| ||||||||||||| | |||||| |||||||||| | || ||||| ||||| Sbjct 479 TTGAGAGATGGCCCTTCCACTTGGAACCATCGGATCACTAAGGCCAACTTTCATCCCTGC 538 Query 85 TCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACT 129 |||| || ||| |||||||||| ||| |||| ||||||| Sbjct 539 TCGATGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 583 >seq2815171 Length=574 Score = 78.8 bits (86), Expect = 8e-13 Identities = 81/106 (76%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||| |||||||| || | |||| |||||||||| | || |||||| ||| Sbjct 227 GTTGAGCGATGACCCTTCCACTCGGCACCATCGGATCACTAAGGCCAACTTTCGTCCCTT 168 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACT 129 ||||| || ||| | |||||||| ||| |||| ||||||| Sbjct 167 CTCGATGGGTGGGTCTTGTAGTCAAGCTCCCTTCTGCCTTTGCACT 122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426556047340