Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_009552.2 Length=40863 Score E Sequences producing significant alignments: (Bits) Value seq94137 192 1e-44 >seq94137 Length=18398 Score = 192 bits (212), Expect = 1e-44 Identities = 362/530 (68%), Gaps = 2/530 (0%) Strand=Plus/Minus Query 37692 ACGGCGTCGAAAAAGAA-GACCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAG 37750 |||||| || |||||| ||||| || ||| ||| || |||||| | ||||||| ||| Sbjct 9019 ACGGCG-CGGAAAAGACCGACCGCACCGGCACCGGGACACTGTCGATCTTCGGCCATCAG 8961 Query 37751 CTCCGCTTCAACTTACAAGATGGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGC 37810 | || ||||| | | || || ||||| ||||||| || || | ||| | Sbjct 8960 ATGCGGTTCAATCTGGCATCGGGTTTCCCGCTGCTGACAACCAAGAAGCTTCATCTGAAG 8901 Query 37811 TCCATCATTTATGAACTGCTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAG 37870 || ||| | | |||||||| |||||| | || || || ||| || || || | Sbjct 8900 TCGATCGTCCACGAACTGCTGTGGTTTCTGGCGGGTGACACCAACATCAAATACCTGAAC 8841 Query 37871 GAGAATGGCGTGACGATTTGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATT 37930 || || ||||| |||||||| |||||||| ||||| |||||| ||||||||||| | Sbjct 8840 GACAACGGCGTTCGCATTTGGGACGAGTGGGCTGACGAGAACGGCAATCTCGGCCCGGTC 8781 Query 37931 TACGGCGCGCAATGGCGCTCGTGGAAGGGAGCAGACGGGAAAACCATCGACCAGATCGCA 37990 || ||| |||| ||||| || ||| | | || || || ||||||||||| | Sbjct 8780 TATGGCTCGCAGTGGCGGTCATGGCCCGCGCCGGATGGCGGCACGATCGACCAGATTTCC 8721 Query 37991 TGGGTTGTCGAAGAGATCAAACGAAATCCGCATTCACGCCGGCTGCTGGTGAGCGCTTGG 38050 || |||| |||| ||||||| | || ||| ||||| | || ||||| ||| Sbjct 8720 AATGTGATCGAGATGATCCGGAAAAATCCGGACTCGCGCAGGCTGATCGTCAGCGCGTGG 8661 Query 38051 AATGTAGCAGAATTGGACGAGATGAAGCTGCCGCCGTGTCATTACGCCTTTCAGTTCTAT 38110 ||| || ||| | ||| ||||| | ||||||| || || | | || ||||||||| Sbjct 8660 AATCCGGCCGAAGTCGACAAGATGGCGTTGCCGCCATGCCACTGCCTGTTCCAGTTCTAT 8601 Query 38111 GTCGCCAACGGCCGGTTGTCATGCATGTGGCAGCAGCGCTCCGTTGATACGTTTTTAGGG 38170 ||||| |||||| | | || ||| | | |||||||| | ||| ||| | || Sbjct 8600 GTCGCGAACGGCAAGCTCTCGTGCCAGCTCTACCAGCGCTCAGCCGATGTGTTCCTCGGC 8541 Query 38171 TTGCCGTTTAACATCGCGAGCTACGCGCTGTTGACGCATATGGTAGCCCA 38220 ||||||| || |||||| |||||| ||| | ||| ||||| || || Sbjct 8540 GTGCCGTTCAATATCGCGTCCTACGCCCTGCTCACGATGATGGTGGCGCA 8491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114732930261750