Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq89744 87.8 1e-12 seq59164 87.8 1e-12 seq2222 86.0 4e-12 seq1080979 82.4 5e-11 >seq89744 Length=19024 Score = 87.8 bits (96), Expect = 1e-12 Identities = 157/228 (69%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 |||||| || | || | ||| || || | || ||||| | ||| | | || || | Sbjct 15427 CATAAAGAGTTTTGGCACCCAAAGCGCAAAAAACAGATCACATGCCCTGTTTTCTTCCTT 15368 Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459 || || || || | ||| || || |||||||| | || ||||||||||| || | ||| Sbjct 15367 CCCATGGTTCTTCCTCAACTCCAGAAACTCAAAAAA-TCTGCATGCCATGGATCTAAGTA 15309 Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTT 66519 ||||| || | ||| | | || || |||||||| || || || ||||| || || Sbjct 15308 CATGGCAAAGGCACCCTTCCTCTTCCCTCCACCTTGATCAACATATCGAGCAGTATCATT 15249 Query 66520 GAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567 ||| || | |||||| || || | || || ||| ||||||| || || Sbjct 15248 GAATACCCTCAACATTGGCACAATACCATTGGATGTGCCATTTGTTCC 15201 >seq59164 Length=25038 Score = 87.8 bits (96), Expect = 1e-12 Identities = 157/228 (69%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 |||||| || || || | ||| || || | || ||||| | ||| | | || || | Sbjct 3583 CATAAAGAGTTCTGGCACCCAAAGCGCAAAAAATAGATCACATGCCCTGTTTTCTTCCTT 3642 Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459 || || || || | ||| || || |||||||| | | ||||||||||| || | ||| Sbjct 3643 CCCATGGTTCTTCCTCAACTCCAGAAACTCAAAAAA-TATGCATGCCATGGATCTAAGTA 3701 Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTT 66519 |||| || | ||| | | ||||| |||||||| || || || | ||| || || Sbjct 3702 CATGGAAAAGGCACCCTTCCTCTTGCCTCCACCTTGATCAACATATCAAGCAGTATCATT 3761 Query 66520 GAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567 ||| || | |||||| || |||| || || ||| ||||||| || || Sbjct 3762 GAATACCCTCAACATTGGCACGATACCATTGGATGTGCCATTTGTTCC 3809 >seq2222 Length=73515 Score = 86.0 bits (94), Expect = 4e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 61543 GCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTG 61602 |||||||||||||||||||| | || |||||||| ||||| || ||| ||||||| | Sbjct 39783 GCAATCTTTTGGTTGAAGAAGAGGGGGCTTATGCCTGGTCTAACTTTCTCCAATGAGCTT 39724 Query 61603 ATATCACGCGACGAGGGCATGCATTGTGATTTTGC 61637 || ||| | || || ||| | |||||||| ||||| Sbjct 39723 ATTTCAAGGGATGAAGGCCTCCATTGTGACTTTGC 39689 >seq1080979 Length=2029 Score = 82.4 bits (90), Expect = 5e-11 Identities = 119/167 (71%), Gaps = 1/167 (1%) Strand=Plus/Plus Query 66401 CCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAG 66460 || || || || | ||| || || |||||||| | || ||||||||||| || | ||| Sbjct 13 CCATGGTTCTTCCTCAACTCCAGAAACTCAAAAAA-TCTGCATGCCATGGATCTAAGTAC 71 Query 66461 ATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTG 66520 ||||| || || ||| | | ||||| |||||||| || || || ||||| || ||| Sbjct 72 ATGGCAAAGGAACCCTTCCTCTTGCCTCCACCTTGATCAACATATCGAGCAGTATCATTG 131 Query 66521 AAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567 || || |||||| | || | || || ||| ||||||| || || Sbjct 132 AATACCATCAACATTTGCACAATACCATTGGATGTGCCATTTGTTCC 178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347885156394800